ID A0A087H2F8_ARAAL Unreviewed; 582 AA.
AC A0A087H2F8;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN OrderedLocusNames=AALP_Aa4g105900 {ECO:0000313|EMBL:KFK36310.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK36310.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM002872; KFK36310.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087H2F8; -.
DR EnsemblPlants; KFK36310; KFK36310; AALP_AA4G105900.
DR Gramene; KFK36310; KFK36310; AALP_AA4G105900.
DR Proteomes; UP000029120; Chromosome 4.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 140..174
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 273..307
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 490..582
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 582 AA; 64857 MW; A6AF05D0912ED5F0 CRC64;
MLIPHYLHQL KLCARNRTLT TAKSLHAQIV KLGIAQCSPL ANTLVNVYGK CGSASHALQL
FDEMPQRDHI AWASVLTALN QANLSGKTLS VFTSSNGLRP DDFVYSALVK ACANLGTIKH
GKQVHVDSAK AVFDSIRVKN TISWTAMVSG FAKSGRKEEA LELFRRIPVK NLYSWTALIS
GFVQSGKGLE AFSVFIEMRR EKVDILDPLV LSSIVGACAN LAASIAGRQV HGLVIALGFD
SCVFISNALI DMYAKCSDVV AAKDIFSRMR HRDVVSWTSL IVGMAQHGQA ENAMALYDDM
VSHGVKPNEV TFVGLIYACS HVGFVAKGRE LFQSMTKDYK IRPSLQHYTC LLDLLGRSGL
LDEAENLIHS MPFPPDEPTW AALLSACKRQ GQGQMGVRIA DYLLSSFKPK DPSTYILLSN
IYASASLWGK VSEARRKLGD MEVRKDPGYS SVEVRKETEV FYAGETSHPL KHEIFGLLKE
FEEEMRRRKG YVPDTSWILH DMDEQEKEKL LFWHSERSAV AYGLLKAVQG TPIRIVKNLR
VCGDCHVVLK HISEITEREI IVRDATRYHH FKGGKCSCND FW
//
