ID A0A087H2U5_ARAAL Unreviewed; 317 AA.
AC A0A087H2U5;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN OrderedLocusNames=AALP_Aa4g125700 {ECO:0000313|EMBL:KFK36447.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK36447.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002872; KFK36447.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087H2U5; -.
DR EnsemblPlants; KFK36447; KFK36447; AALP_AA4G125700.
DR Gramene; KFK36447; KFK36447; AALP_AA4G125700.
DR eggNOG; KOG0118; Eukaryota.
DR OMA; AFQQRWN; -.
DR OrthoDB; 735947at2759; -.
DR Proteomes; UP000029120; Chromosome 4.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48025; OS02G0815200 PROTEIN; 1.
DR PANTHER; PTHR48025:SF6; RRM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 88..165
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 187..266
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 274..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 280..299
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 317 AA; 34764 MW; 621D1C963EF29636 CRC64;
MAVLEAALSI LSFSSSSSSS SKPYLFTRHS KPTTLSLRIP TPVFSLNFPL VAGGDNPRRL
VSVLCSVTEE ETSAEEKTEE THKSNLRRKL FVYNLPWSLS INDISKLFGQ CGTVSNVEII
KQKDGKNRGF AFVTMASGEE AQAAVDKFDS FQVSGRIIRV NFAKRFKKPT PKLPNALPFI
SPGETRHKLY VSNLAWKARS THLREFFTAA DFNLVSARVV FADPEGRASG YGFVSFPTRE
EAEAAISKLN GKELMGRPVS LKFSFRTASE LEDGATIEDS ITSEDGNTIG DTITSEENPE
DGNTIEDNDT SEGNPAE
//