ID   A0A087H9B5_ARAAL        Unreviewed;       737 AA.
AC   A0A087H9B5;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   RecName: Full=SWIRM domain-containing protein {ECO:0000259|PROSITE:PS50934};
GN   OrderedLocusNames=AALP_Aa3g150900 {ECO:0000313|EMBL:KFK38717.1};
OS   Arabis alpina (Alpine rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX   NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK38717.1, ECO:0000313|Proteomes:UP000029120};
RN   [1] {ECO:0000313|Proteomes:UP000029120}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX   PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA   Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA   Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA   Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA   Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA   Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA   Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA   Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA   Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT   "Genome expansion of Arabis alpina linked with retrotransposition and
RT   reduced symmetric DNA methylation.";
RL   Nat. Plants 1:14023-14023(2015).
CC   -!- SIMILARITY: Belongs to the flavin monoamine oxidase family.
CC       {ECO:0000256|ARBA:ARBA00005995}.
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DR   EMBL; CM002871; KFK38717.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A087H9B5; -.
DR   EnsemblPlants; KFK38717; KFK38717; AALP_AA3G150900.
DR   Gramene; KFK38717; KFK38717; AALP_AA3G150900.
DR   eggNOG; KOG0029; Eukaryota.
DR   OMA; AVYYDMD; -.
DR   OrthoDB; 5402444at2759; -.
DR   Proteomes; UP000029120; Chromosome 3.
DR   GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR   GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR   Gene3D; 3.90.660.10; -; 1.
DR   Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR002937; Amino_oxidase.
DR   InterPro; IPR036188; FAD/NAD-bd_sf.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR007526; SWIRM.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR10742; FLAVIN MONOAMINE OXIDASE; 1.
DR   PANTHER; PTHR10742:SF386; LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A; 1.
DR   Pfam; PF01593; Amino_oxidase; 1.
DR   Pfam; PF04433; SWIRM; 1.
DR   SUPFAM; SSF54373; FAD-linked reductases, C-terminal domain; 1.
DR   SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS50934; SWIRM; 1.
PE   3: Inferred from homology;
KW   Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029120}.
FT   DOMAIN          53..154
FT                   /note="SWIRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50934"
FT   REGION          1..22
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   737 AA;  81302 MW;  173A3237D4550590 CRC64;
     MDTPASEVTG PRMTLRKKAS RKNYDENAMD DLIDEHIGGS SKKKLKKKKK DLEKETETEA
     LIALSVGFPI DELLEEEIRA GVVRELGGKE QNDYIVVRNH IVARWRSNVR LWLLKDQIRE
     TVSSEFEHLI SSAYDFLLYN GYINFGVSSL FAPYVPEDGN EGSVVVIGAG LAGLAAARQL
     LAFGFKVLVL EARSRPGGRV YTQKIGGKES FAAVELGGSV ITGLHANPLG VLARQLSIPL
     HKVRDNCPLY NCDGSVVDKV ADSKVEVGFN KLLDKVTEVR EMMDGEANKI SLGEVLETLR
     VLYGVAKDSE ERKLFDWHLA NLEYANAGCL SNLSAAYWDQ DDPYEMGGDH CFLAGGNWRL
     VNALAEGLPI IYGKTVDTIK YGERGVEVVS GSQVFQADMI LCTVPLGVLK KRCIKFEPEL
     PRRKLAAIDR LGFGLLNKVA MLFPSVFWGD DLDTFGSLNE SSINRGEFFL FYAYHTVSGG
     PALVALVAGE AAQRFECTEP STLLHRVLKK LRGIYGPKGV VVPDPIQTIC TRWGSDPLSY
     GSYSHVRVGS SGVDYDILAE SLNNRLFFAG EATTRQHPAT MHGAYLSGLR EASRILHVVN
     GFHTNPKKPV QRYSGVTNDV LDDLFKRPDI ATEKLSFVFN PLTEDLKSVG LVRVCFDTFE
     DDPTNRLQLY TILSREQAQK LQELGESSSE SKLAYLTNTL GLKLMGTNSV LDTCGALISI
     IANARKGRSR TRAVARQ
//