ID A0A087HER4_ARAAL Unreviewed; 563 AA.
AC A0A087HER4;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=AALP_Aa2g019400 {ECO:0000313|EMBL:KFK40616.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK40616.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002870; KFK40616.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087HER4; -.
DR EnsemblPlants; KFK40616; KFK40616; AALP_AA2G019400.
DR Gramene; KFK40616; KFK40616; AALP_AA2G019400.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; SRCGDIM; -.
DR OrthoDB; 1129877at2759; -.
DR Proteomes; UP000029120; Chromosome 2.
DR GO; GO:0016554; P:cytidine to uridine editing; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR47925; OS01G0913400 PROTEIN-RELATED; 1.
DR PANTHER; PTHR47925:SF29; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 21..55
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 86..120
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 231..261
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 262..292
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 293..327
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 393..423
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 425..459
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 563 AA; 65037 MW; 0D0AC69D5E89AF17 CRC64;
MIRSGYIVEA REIFEKLEAR NTVTWNTMIT GYVKRREMTQ ARKLFDKMPE RDVVTWNAMI
SGYVSCGGVK FLEEARKLFD EMPSRDFFSW NTMISGYAKN RMVSEALLLF KSMPERNGVS
WSAMITGFCY NGEAYRALEL FRRMPKKDSC SLCALVSGLI KNEKLEEAAW VLAQYGSLDS
GKEDLVYAYN TLIVGYGQRG QVEAARRVFD QIPDICGDDH GGGFRERFRR NFVSWNSMIK
AYLKVGDVVS ARLLFDQMKD RDTISWNTMI DGYVHVSRME EAFDLFTEMP NRDTHSWNMM
VSGYASVGNV ELARQYFERM PEKNIVSWNS IIAAYEKNKD YREAFDVFIR MNIEREKPDP
HTLTSLLSVS TGLVNLRLGM QMHQIVLKTV IPDVPIHNAL ITMYSRCGEI TESRRIFDEM
KLRREVITWN AMIGGYAFHG NASEALNMFR SMKSNGIHPS HITYVSVLNA CAHAGLVDEA
KAQFMSMVSE YKIEPQMEHY SSLVDVICRQ GRFEDAMDVI RSMPFEPDKT LKRFRDSNQR
AQHLMYCCTT CMRTWDYGTK LLK
//
