ID A0A087QIF9_APTFO Unreviewed; 390 AA.
AC A0A087QIF9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=RNA binding protein fox-1 1 {ECO:0000313|EMBL:KFM01013.1};
DE Flags: Fragment;
GN ORFNames=AS27_07143 {ECO:0000313|EMBL:KFM01013.1};
OS Aptenodytes forsteri (Emperor penguin).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae;
OC Aptenodytes.
OX NCBI_TaxID=9233 {ECO:0000313|EMBL:KFM01013.1, ECO:0000313|Proteomes:UP000053286};
RN [1] {ECO:0000313|EMBL:KFM01013.1, ECO:0000313|Proteomes:UP000053286}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_AS27 {ECO:0000313|EMBL:KFM01013.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KL225618; KFM01013.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087QIF9; -.
DR STRING; 9233.A0A087QIF9; -.
DR Proteomes; UP000053286; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0007399; P:nervous system development; IEA:InterPro.
DR GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12407; RRM_FOX1_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR025670; Fox-1_C_dom.
DR InterPro; IPR034237; FOX1_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR017325; RBFOX1-3.
DR InterPro; IPR047131; RBFOX1-like.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR15597; ATAXIN 2-BINDING PROTEIN 1-RELATED; 1.
DR PANTHER; PTHR15597:SF26; RNA BINDING PROTEIN FOX-1 HOMOLOG 1; 1.
DR Pfam; PF12414; Fox-1_C; 1.
DR Pfam; PF00076; RRM_1; 1.
DR PIRSF; PIRSF037932; Ataxin_2_bd_A2BP; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000053286};
KW RNA-binding {ECO:0000256|PIRSR:PIRSR037932-1, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 110..186
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..116
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 48..112
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 111
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 119
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 120
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 144
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 149
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 153
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 177
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 187
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFM01013.1"
FT NON_TER 390
FT /evidence="ECO:0000313|EMBL:KFM01013.1"
SQ SEQUENCE 390 AA; 41960 MW; B554145C8BF666CD CRC64;
LQGNQEATAP PDTMAQPYAS AQFAPPQNGI PAEYTAPHPH PAPDYTGQTT VPEHTLNMYP
PAQTHSEQSA ADTNAQTVSG TATQTDDAAQ TDGQQQTQSS ENTENKSQPK RLHVSNIPFR
FRDPDLRQMF GQFGKILDVE IIFNERGSKG FGFVTFENSA DADRAREKLH GTVVEGRKIE
VNNATARVMT NKKTVNPYTN GWKLNPVVGA VYSPEFYAGR VLLCQANQEG SPVYSAPSSL
VYTSTMPGFP YPAATAAAAY RGAHLRGRGR TVYNTFRAAA PPPPIPAYGG VVYQDGFYGA
DIYGGYAAYR YAQPATATAA AYSDSYGRVY AADPYHHTLA PAATYGVGAV NAFAPLTDAK
TRSHADDVGL VLSSLQASIY RGGYSRFAPY
//
