ID A0A087S1R6_9ARCH Unreviewed; 306 AA.
AC A0A087S1R6;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=Transcription initiation factor IIB {ECO:0000256|ARBA:ARBA00013932};
GN ORFNames=AAA799P11_00659 {ECO:0000313|EMBL:KFM19670.1};
OS Marine Group I thaumarchaeote SCGC AAA799-P11.
OC Archaea; Nitrososphaerota; Marine Group I.
OX NCBI_TaxID=1502295 {ECO:0000313|EMBL:KFM19670.1, ECO:0000313|Proteomes:UP000029387};
RN [1] {ECO:0000313|EMBL:KFM19670.1, ECO:0000313|Proteomes:UP000029387}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCGC AAA799-P11 {ECO:0000313|EMBL:KFM19670.1};
RA Ngugi D.K., Blom J., Alam I., Rashid M., Baalawi W., Zhang G., Hikmawan T.,
RA Guan Y., Antunes A., Siam R., El-Dorry H., Bajic V., Stingl U.;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the TFIIB family.
CC {ECO:0000256|ARBA:ARBA00010857}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFM19670.1}.
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DR EMBL; JOSZ01000006; KFM19670.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087S1R6; -.
DR PATRIC; fig|1502295.3.peg.647; -.
DR Proteomes; UP000029387; Unassembled WGS sequence.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR CDD; cd20550; CYCLIN_TFIIB_archaea_like_rpt2; 1.
DR Gene3D; 1.10.472.170; -; 1.
DR Gene3D; 1.10.472.10; Cyclin-like; 1.
DR InterPro; IPR013763; Cyclin-like_dom.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR023486; TFIIB_CS.
DR InterPro; IPR013150; TFIIB_cyclin.
DR InterPro; IPR013137; Znf_TFIIB.
DR PANTHER; PTHR11618:SF13; TRANSCRIPTION INITIATION FACTOR IIB; 1.
DR PANTHER; PTHR11618; TRANSCRIPTION INITIATION FACTOR IIB-RELATED; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF08271; TF_Zn_Ribbon; 1.
DR Pfam; PF00382; TFIIB; 2.
DR PRINTS; PR00685; TIFACTORIIB.
DR SMART; SM00385; CYCLIN; 2.
DR SUPFAM; SSF47954; Cyclin-like; 2.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS00782; TFIIB; 2.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:KFM19670.1};
KW Protein biosynthesis {ECO:0000313|EMBL:KFM19670.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000029387};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 123..204
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
FT DOMAIN 217..298
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
SQ SEQUENCE 306 AA; 34210 MW; 68C42351E137C235 CRC64;
MVTLAKNSNC LRCGKNSLLT DSVTGEQFCS KCGYVVSEKL NESGPEWRSF QTETGDNPAR
TGAPSSLLMH DMGLSTVINP INKDSTGRPL STSMKSTIER LRTWDSRSQS REPVDRNLRQ
ALNELSRMKD KIALSSNVLE KAAYLYRKAL EKKLVRGRSI SAMIAASLYA ACRDTETPRT
LKDLSDAANV KRKDIARCYR LLHYELELKM PVVNSIQCIS RIASKLELSE KTKRHAVKIL
QKVQDNKESA GKDPMGLAAT ALYVSCIKNQ ENITQRNLAE AANVTEVTIR NRFKGLKKQN
LKIDVL
//
