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Database: UniProt
Entry: A0A087XIR9_POEFO
LinkDB: A0A087XIR9_POEFO
Original site: A0A087XIR9_POEFO 
ID   A0A087XIR9_POEFO        Unreviewed;       850 AA.
AC   A0A087XIR9;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 2.
DT   24-JAN-2024, entry version 45.
DE   SubName: Full=Transcription initiation factor TFIID subunit 4-like {ECO:0000313|Ensembl:ENSPFOP00000005672.2};
OS   Poecilia formosa (Amazon molly) (Limia formosa).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Poecilia.
OX   NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000005672.2, ECO:0000313|Proteomes:UP000028760};
RN   [1] {ECO:0000313|Proteomes:UP000028760}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=female {ECO:0000313|Proteomes:UP000028760};
RA   Schartl M., Warren W.;
RL   Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSPFOP00000005672.2}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the TAF4 family.
CC       {ECO:0000256|ARBA:ARBA00006178}.
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DR   EMBL; AYCK01009725; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_007563459.1; XM_007563397.2.
DR   AlphaFoldDB; A0A087XIR9; -.
DR   STRING; 48698.ENSPFOP00000005672; -.
DR   Ensembl; ENSPFOT00000005681.2; ENSPFOP00000005672.2; ENSPFOG00000005685.2.
DR   GeneID; 103145803; -.
DR   eggNOG; KOG2341; Eukaryota.
DR   GeneTree; ENSGT00390000011620; -.
DR   OMA; RITQCMN; -.
DR   OrthoDB; 2910924at2759; -.
DR   Proteomes; UP000028760; Unassembled WGS sequence.
DR   GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR   GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; IEA:UniProt.
DR   CDD; cd08045; TAF4; 1.
DR   Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR   Gene3D; 1.20.120.1110; TAFH/NHR1 domain; 1.
DR   InterPro; IPR009072; Histone-fold.
DR   InterPro; IPR045144; TAF4.
DR   InterPro; IPR007900; TAF4_C.
DR   InterPro; IPR037249; TAFH/NHR1_dom_sf.
DR   InterPro; IPR003894; TAFH_NHR1.
DR   PANTHER; PTHR15138:SF18; TATA-BOX-BINDING PROTEIN-ASSOCIATED FACTOR 4; 1.
DR   PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR   Pfam; PF05236; TAF4; 1.
DR   Pfam; PF07531; TAFH; 1.
DR   SMART; SM00549; TAFH; 1.
DR   SUPFAM; SSF47113; Histone-fold; 1.
DR   SUPFAM; SSF158553; TAFH domain-like; 1.
DR   PROSITE; PS51119; TAFH; 1.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028760};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          372..469
FT                   /note="TAFH"
FT                   /evidence="ECO:0000259|PROSITE:PS51119"
FT   REGION          1..78
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          137..156
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          163..184
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          734..754
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          776..815
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        33..78
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        163..182
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        788..815
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   850 AA;  89505 MW;  60412CAA281CC601 CRC64;
     MDASTGSTDT KRGHEPGKPL VVGDGISFPP NQPGKVASYS VQTFNGSQTM NSHNSGSVTP
     LEGAKATSGT GNNNNSSSST VISAAAGSTG AVLSKGLTGV SLPPSSNSVI QTPLMNSDGV
     SAASQAAGPT VTLVRPPMQT AGSGTTLNGS STASPAVAAN ASNQTGIGTQ NPPVNNGQPV
     SAGSHIIKAE PPTTIIQSAP QSAAAPAAAS SISAPRPLGM AAAGAPGITT QMLAPRLPQT
     SPGQPSVHNI QIPPGMVLVR SESGQLLVIP QQTLAQMQAQ AQGGMVPRTA TPTNVSAAQA
     PGATIISRQV SPGTIIRPGC PPPVSLAATT ALHRAPILPS SVGATVPGLA PRTLTPTPGT
     TVTSVTVSKE TMENVKKCKN FLSTLIKLAS SGKQSTETAA TVRELVKDLL EDKLEAEEFT
     SRLYKELNSS PQPYLVPFLK RSLPALRQLT PDSAAFIQQS QLPQPASVAV SSTSATCTTV
     VLGSPGPRLT TPGSRPQLQP TVSQGQTTSL VLQPQQQRAM LRPQVTLPTT PMMALRNQTP
     GRIMVGQQQV QLKELQPAVQ LRPEVTLVSR QVSAVALTQA QKNKLKEAGG TFKDDDDIND
     VASMAGVNLS EESANILATN SGLVGAVTHS CKDEAFLSYA LLQRRMLEIG MKYGVTELGT
     EVVNYVSHAT QQRLLNLLEK VSQVAQQKNI NFKQEDDSYE QSSDVRTQLK FFEQLDQLEK
     QRKEEQEREI LLKAAKSRAR QEDPEQLRLK QKAKEMQQQE LAQMRQREAN LTALAAIGPR
     KKKKNLDSPS SSASAEGSGT GLSLTGAAGS SGSRLTRQRI TRVNLRDLLF CLENERFTSR
     SHFLYKGFLK
//
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