ID A0A087XIR9_POEFO Unreviewed; 850 AA.
AC A0A087XIR9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 2.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=Transcription initiation factor TFIID subunit 4-like {ECO:0000313|Ensembl:ENSPFOP00000005672.2};
OS Poecilia formosa (Amazon molly) (Limia formosa).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Poecilia.
OX NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000005672.2, ECO:0000313|Proteomes:UP000028760};
RN [1] {ECO:0000313|Proteomes:UP000028760}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000028760};
RA Schartl M., Warren W.;
RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSPFOP00000005672.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF4 family.
CC {ECO:0000256|ARBA:ARBA00006178}.
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DR EMBL; AYCK01009725; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_007563459.1; XM_007563397.2.
DR AlphaFoldDB; A0A087XIR9; -.
DR STRING; 48698.ENSPFOP00000005672; -.
DR Ensembl; ENSPFOT00000005681.2; ENSPFOP00000005672.2; ENSPFOG00000005685.2.
DR GeneID; 103145803; -.
DR eggNOG; KOG2341; Eukaryota.
DR GeneTree; ENSGT00390000011620; -.
DR OMA; RITQCMN; -.
DR OrthoDB; 2910924at2759; -.
DR Proteomes; UP000028760; Unassembled WGS sequence.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0006366; P:transcription by RNA polymerase II; IEA:UniProt.
DR CDD; cd08045; TAF4; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.20.120.1110; TAFH/NHR1 domain; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR045144; TAF4.
DR InterPro; IPR007900; TAF4_C.
DR InterPro; IPR037249; TAFH/NHR1_dom_sf.
DR InterPro; IPR003894; TAFH_NHR1.
DR PANTHER; PTHR15138:SF18; TATA-BOX-BINDING PROTEIN-ASSOCIATED FACTOR 4; 1.
DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR Pfam; PF05236; TAF4; 1.
DR Pfam; PF07531; TAFH; 1.
DR SMART; SM00549; TAFH; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
DR SUPFAM; SSF158553; TAFH domain-like; 1.
DR PROSITE; PS51119; TAFH; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000028760};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 372..469
FT /note="TAFH"
FT /evidence="ECO:0000259|PROSITE:PS51119"
FT REGION 1..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 137..156
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 163..184
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 734..754
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 776..815
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..78
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 163..182
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 788..815
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 850 AA; 89505 MW; 60412CAA281CC601 CRC64;
MDASTGSTDT KRGHEPGKPL VVGDGISFPP NQPGKVASYS VQTFNGSQTM NSHNSGSVTP
LEGAKATSGT GNNNNSSSST VISAAAGSTG AVLSKGLTGV SLPPSSNSVI QTPLMNSDGV
SAASQAAGPT VTLVRPPMQT AGSGTTLNGS STASPAVAAN ASNQTGIGTQ NPPVNNGQPV
SAGSHIIKAE PPTTIIQSAP QSAAAPAAAS SISAPRPLGM AAAGAPGITT QMLAPRLPQT
SPGQPSVHNI QIPPGMVLVR SESGQLLVIP QQTLAQMQAQ AQGGMVPRTA TPTNVSAAQA
PGATIISRQV SPGTIIRPGC PPPVSLAATT ALHRAPILPS SVGATVPGLA PRTLTPTPGT
TVTSVTVSKE TMENVKKCKN FLSTLIKLAS SGKQSTETAA TVRELVKDLL EDKLEAEEFT
SRLYKELNSS PQPYLVPFLK RSLPALRQLT PDSAAFIQQS QLPQPASVAV SSTSATCTTV
VLGSPGPRLT TPGSRPQLQP TVSQGQTTSL VLQPQQQRAM LRPQVTLPTT PMMALRNQTP
GRIMVGQQQV QLKELQPAVQ LRPEVTLVSR QVSAVALTQA QKNKLKEAGG TFKDDDDIND
VASMAGVNLS EESANILATN SGLVGAVTHS CKDEAFLSYA LLQRRMLEIG MKYGVTELGT
EVVNYVSHAT QQRLLNLLEK VSQVAQQKNI NFKQEDDSYE QSSDVRTQLK FFEQLDQLEK
QRKEEQEREI LLKAAKSRAR QEDPEQLRLK QKAKEMQQQE LAQMRQREAN LTALAAIGPR
KKKKNLDSPS SSASAEGSGT GLSLTGAAGS SGSRLTRQRI TRVNLRDLLF CLENERFTSR
SHFLYKGFLK
//