ID A0A087YC59_POEFO Unreviewed; 421 AA.
AC A0A087YC59;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 2.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Basic helix-loop-helix family member e41 {ECO:0000313|Ensembl:ENSPFOP00000015612.2};
OS Poecilia formosa (Amazon molly) (Limia formosa).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Poecilia.
OX NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000015612.2, ECO:0000313|Proteomes:UP000028760};
RN [1] {ECO:0000313|Proteomes:UP000028760}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000028760};
RA Schartl M., Warren W.;
RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSPFOP00000015612.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AYCK01001897; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_007545587.1; XM_007545525.2.
DR AlphaFoldDB; A0A087YC59; -.
DR STRING; 48698.ENSPFOP00000015612; -.
DR Ensembl; ENSPFOT00000015634.2; ENSPFOP00000015612.2; ENSPFOG00000015542.2.
DR GeneID; 103133677; -.
DR KEGG; pfor:103133677; -.
DR CTD; 79365; -.
DR eggNOG; KOG4304; Eukaryota.
DR GeneTree; ENSGT00940000161014; -.
DR OMA; KKPKMNW; -.
DR OrthoDB; 2968390at2759; -.
DR Proteomes; UP000028760; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:Ensembl.
DR GO; GO:0009409; P:response to cold; IEA:Ensembl.
DR GO; GO:0030431; P:sleep; IEA:Ensembl.
DR Gene3D; 6.10.250.980; -; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR003650; Orange_dom.
DR PANTHER; PTHR10985; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED; 1.
DR PANTHER; PTHR10985:SF76; CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 41; 1.
DR Pfam; PF07527; Hairy_orange; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SMART; SM00511; ORANGE; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR SUPFAM; SSF158457; Orange domain-like; 1.
DR PROSITE; PS50888; BHLH; 1.
DR PROSITE; PS51054; ORANGE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028760};
KW Repressor {ECO:0000256|ARBA:ARBA00022491}.
FT DOMAIN 45..100
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT DOMAIN 132..167
FT /note="Orange"
FT /evidence="ECO:0000259|PROSITE:PS51054"
FT REGION 209..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 362..421
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 224..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 371..389
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 405..421
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 421 AA; 46337 MW; B772A17038EF5CB1 CRC64;
MDERIPHLQD RQFMEHADFL GMDFPPLYMC KSKRGIKRED SGKDAYKLPH RLIEKKRRDR
INECIGQLKD LLPEHLKLST LGHLEKAVVL ELTLKHLNAL TAVTEQQHQK IIALQNGDRS
LKPPIHTDLD AFHSGFQTCA KEVLQYLSQA ENWTAREQRC AQLINHLHKV LAQFQPDAPP
LQHQLPAGDA QDAQKSDCQT NCVPVIQRTQ GGELNENDTD TDSGYGGEAE KSDGKDKECE
RNKAVKIKQE FGDDRAAKKT KMCWSGNADP TRPDVAFMNS LMGLSGVGQQ TPICMPFYFI
NPSAAAPYMP FFDKSNIEKY MYPAAAALAS PFPWLYPAHA SAAAAAAAAA AFPGLSAHLG
AAAQPKDSQL QDDSGSREAE ASSPEEHEET PASDDGEGDV DDTSPDSKNS PQEQLSACQT
S
//