ID A0A090L1G4_STRRB Unreviewed; 581 AA.
AC A0A090L1G4;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=DNA-directed RNA polymerases I and III subunit RPAC1 {ECO:0000313|EMBL:CEF61957.1, ECO:0000313|WBParaSite:SRAE_1000023300.1};
GN ORFNames=SRAE_1000023300 {ECO:0000313|EMBL:CEF61957.1,
GN ECO:0000313|WBParaSite:SRAE_1000023300.1,
GN ECO:0000313|WormBase:SRAE_1000023300};
OS Strongyloides ratti (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
OC Strongyloides.
OX NCBI_TaxID=34506 {ECO:0000313|EMBL:CEF61957.1};
RN [1] {ECO:0000313|EMBL:CEF61957.1, ECO:0000313|Proteomes:UP000035682}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ED321 {ECO:0000313|Proteomes:UP000035682,
RC ECO:0000313|WBParaSite:SRAE_1000023300.1}, and ED321 Heterogonic
RC {ECO:0000313|EMBL:CEF61957.1};
RA Martin A.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|WBParaSite:SRAE_1000023300.1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SIMILARITY: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00025804}.
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DR EMBL; LN609528; CEF61957.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A090L1G4; -.
DR STRING; 34506.A0A090L1G4; -.
DR EnsemblMetazoa; SRAE_1000023300.1; SRAE_1000023300.1; WBGene00256827.
DR WBParaSite; SRAE_1000023300.1; SRAE_1000023300.1; WBGene00256827.
DR WormBase; SRAE_1000023300; SRP11613; WBGene00256827; -.
DR OrthoDB; 5472982at2759; -.
DR Proteomes; UP000035682; Chromosome X.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0001054; F:RNA polymerase I activity; IEA:InterPro.
DR GO; GO:0001056; F:RNA polymerase III activity; IEA:InterPro.
DR CDD; cd07032; RNAP_I_II_AC40; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00320; RNApol_arch_Rpo3; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR022842; RNAP_Rpo3/Rpb3/RPAC1.
DR InterPro; IPR033901; RNAPI/III_AC40.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF13; DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:CEF61957.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000035682};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 282..573
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT REGION 64..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..83
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 581 AA; 65533 MW; 5929E73118D5A04B CRC64;
MVGRKKANLP VSNEDFQSTK ITSPKFDDTI NFIERKNTCK ILSESSTNIL QLPMETPMNS
TVRSINSPMS GSTGGTPPRR SKISTDATPK RVDKQLFSKF NAFVTPAQMD PFRNSSFKIA
QNPDDTNIHG QFLQINRTLE EDIIKSTVRR RPNVKTIAYN TTYERPTAGG REQIQILSES
TIFKQQTLKI ISKIIAGILT FTLRRFDAIQ IFGEIMSMDY EDSNGAMAHE KLIMEEERVL
NTYDSATDYA SNSSSFNIFK DVKNYVNNIR IKIINVIPEE NTIEFDLINV EAPIANTLRR
VLLAEVPTMA IEKVMLYQNT SVIQDEVLCH RLGLLPLKAD PRKFDWPGVK IEGINEEGVD
MEEEPPVDPK KHLVFDFHVK CVESKVKVQS GSKVSNYENE VVKSNQIIWH PIGNQAEEFG
DDPPRMVHDD VIVAKLKGGQ EIEAKLHCVK GIGRDHAKFS PVATASYRLL PTITLKEDVY
GDAAIKFQQC FSEGVVDVVD SEHGPKAVVV NARNDLCSRN VLRHEEFKDI VELGRIKNHF
IFSVESTGAL KAEELVIEAC KIIQWKAQGL KSLVQMKFKK L
//
