ID A0A090L339_STRRB Unreviewed; 116 AA.
AC A0A090L339;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=Small nuclear ribonucleoprotein Sm D2 {ECO:0000256|RuleBase:RU365051};
DE Short=Sm-D2 {ECO:0000256|RuleBase:RU365051};
DE AltName: Full=snRNP core protein D2 {ECO:0000256|RuleBase:RU365051};
GN ORFNames=SRAE_1000018000 {ECO:0000313|EMBL:CEF61904.1,
GN ECO:0000313|WBParaSite:SRAE_1000018000.1,
GN ECO:0000313|WormBase:SRAE_1000018000};
OS Strongyloides ratti (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
OC Strongyloides.
OX NCBI_TaxID=34506 {ECO:0000313|EMBL:CEF61904.1};
RN [1] {ECO:0000313|EMBL:CEF61904.1, ECO:0000313|Proteomes:UP000035682}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ED321 {ECO:0000313|Proteomes:UP000035682,
RC ECO:0000313|WBParaSite:SRAE_1000018000.1}, and ED321 Heterogonic
RC {ECO:0000313|EMBL:CEF61904.1};
RA Martin A.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|WBParaSite:SRAE_1000018000.1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU365051}.
CC -!- SIMILARITY: Belongs to the snRNP core protein family.
CC {ECO:0000256|ARBA:ARBA00008146, ECO:0000256|RuleBase:RU365051}.
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DR EMBL; LN609528; CEF61904.1; -; Genomic_DNA.
DR STRING; 34506.A0A090L339; -.
DR EnsemblMetazoa; SRAE_1000018000.1; SRAE_1000018000.1; WBGene00256774.
DR WBParaSite; SRAE_1000018000.1; SRAE_1000018000.1; WBGene00256774.
DR WormBase; SRAE_1000018000; SRP09443; WBGene00256774; -.
DR OMA; PKTEMSQ; -.
DR OrthoDB; 5485754at2759; -.
DR Proteomes; UP000035682; Chromosome X.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0030532; C:small nuclear ribonucleoprotein complex; IEA:InterPro.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd01720; Sm_D2; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR027248; Sm_D2.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR12777; SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; 1.
DR PANTHER; PTHR12777:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW ECO:0000256|RuleBase:RU365051};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW ECO:0000256|RuleBase:RU365051};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365051};
KW Reference proteome {ECO:0000313|Proteomes:UP000035682};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|RuleBase:RU365051};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 29..115
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
SQ SEQUENCE 116 AA; 13236 MW; C1837E54EFA83AE4 CRC64;
MAKSGVQKCE MSQEQLNAIE EKEFTIGPLS ILTNAVRQNT QILINCRNNK KLLGRVKAFD
RHFNMILEDV RELWTETPKT GKGKKKGQAI AKDRFISKMF LRGDSVILVL KNPFAE
//
