ID A0A090LFI2_STRRB Unreviewed; 313 AA.
AC A0A090LFI2;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=Nematode cuticle collagen, N-terminal domain and Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:CEF66908.1, ECO:0000313|WBParaSite:SRAE_2000157400.1};
GN ORFNames=SRAE_2000157400 {ECO:0000313|EMBL:CEF66908.1,
GN ECO:0000313|WBParaSite:SRAE_2000157400.1,
GN ECO:0000313|WormBase:SRAE_2000157400};
OS Strongyloides ratti (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae;
OC Strongyloides.
OX NCBI_TaxID=34506 {ECO:0000313|EMBL:CEF66908.1};
RN [1] {ECO:0000313|EMBL:CEF66908.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ED321 Heterogonic {ECO:0000313|EMBL:CEF66908.1};
RA Aslett A.Martin.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000035682, ECO:0000313|WBParaSite:SRAE_2000157400.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ED321 {ECO:0000313|Proteomes:UP000035682,
RC ECO:0000313|WBParaSite:SRAE_2000157400.1};
RA Martin A.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|WBParaSite:SRAE_2000157400.1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
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DR EMBL; LN609529; CEF66908.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A090LFI2; -.
DR STRING; 34506.A0A090LFI2; -.
DR EnsemblMetazoa; SRAE_2000157400.1; SRAE_2000157400.1; WBGene00261779.
DR WBParaSite; SRAE_2000157400.1; SRAE_2000157400.1; WBGene00261779.
DR WormBase; SRAE_2000157400; SRP09571; WBGene00261779; -.
DR OMA; IEADFCK; -.
DR OrthoDB; 2882715at2759; -.
DR Proteomes; UP000035682; Chromosome X.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR Gene3D; 1.20.5.320; 6-Phosphogluconate Dehydrogenase, domain 3; 1.
DR InterPro; IPR002486; Col_cuticle_N.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24637:SF288; COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24637; COLLAGEN; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR Pfam; PF01391; Collagen; 2.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 4: Predicted;
KW Collagen {ECO:0000313|EMBL:CEF66908.1};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000035682};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 27..53
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 26..78
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 88..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 120..136
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 313 AA; 31558 MW; 0BB55B08FF345DF1 CRC64;
MDEKSTTSTF NSNSYLINEE QRQMKRVAFF AIVVSTVAVI ASVVTLPMIY SYVASFQSHL
IMESDFCKTR SRDMWSEMSV LFKNTPSTVR AKRQYGSPNP PVVSNGYGPV ANPEPAPTCC
TCQQGPPGPP GPPGDDGPDG TDGNPGIDGT NGRDGAVLGS AINAEPCIIC PPGPPGQQGQ
PGLKGPRGPK GADGKNGQDG KKGERGLPGP PGSQGPMGPV GQKGAPGQPG RLIQVNGPAG
PAGAPGPQGP PGVQGIQGPP GTSQQGPQGP QGDAGAPGPQ GRPGAPGLPG ARGPTGEQGT
CEHCPTPRTP PGY
//
