ID A0A090MA28_OSTTA Unreviewed; 322 AA.
AC A0A090MA28; A0A1Y5I2A1; A0A454XVW0;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=DNA-directed RNA polymerase delta subunit/Asxl {ECO:0000313|EMBL:CEF99582.1};
GN ORFNames=BE221DRAFT_214557 {ECO:0000313|EMBL:OUS43608.1},
GN OT_ostta11g01060 {ECO:0000313|EMBL:CEF99582.1};
OS Ostreococcus tauri.
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Bathycoccaceae; Ostreococcus.
OX NCBI_TaxID=70448 {ECO:0000313|EMBL:CEF99582.1, ECO:0000313|Proteomes:UP000009170};
RN [1] {ECO:0000313|Proteomes:UP000009170}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OTTH0595 {ECO:0000313|Proteomes:UP000009170};
RX PubMed=16868079; DOI=10.1073/pnas.0604795103;
RA Derelle E., Ferraz C., Rombauts S., Rouze P., Worden A.Z., Robbens S.,
RA Partensky F., Degroeve S., Echeynie S., Cooke R., Saeys Y., Wuyts J.,
RA Jabbari K., Bowler C., Panaud O., Piegu B., Ball S.G., Ral J.-P.,
RA Bouget F.-Y., Piganeau G., De Baets B., Picard A., Delseny M., Demaille J.,
RA Van de Peer Y., Moreau H.;
RT "Genome analysis of the smallest free-living eukaryote Ostreococcus tauri
RT unveils many unique features.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:11647-11652(2006).
RN [2] {ECO:0000313|EMBL:CEF99582.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RCC4221 {ECO:0000313|EMBL:CEF99582.1};
RA Derelle E., Ferraz C., Rombauts S., Rouze P., Worden A.Z., Robbens S.,
RA Partensky F., Degroeve S., Echeynie S., Cooke R., Saeys Y., Wuyts J.,
RA Jabbari K., Bowler C., Panaud O., Piegu B., Ball S., Ral J.P., Bouget F.Y.,
RA Piganeau G., De Baets B., Picard A., Delseny M., Demaille J.,
RA Van de Peer Y., Moreau H.;
RT "Genome analysis of the smallest free-living eukaryote Ostreococcus tauri
RT unveils many unique features.";
RL Proc. Natl. Acad. Sci. U.S.A. 131:11647-11652(2006).
RN [3] {ECO:0000313|EMBL:CEF99582.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RCC4221 {ECO:0000313|EMBL:CEF99582.1};
RX PubMed=25494611; DOI=10.1186/1471-2164-15-1103;
RA Blanc-Mathieu R., Verhelst B., Derelle E., Rombauts S., Bouget F.Y.,
RA Carre I., Chateau A., Eyre-Walker A., Grimsley N., Moreau H., Piegu B.,
RA Rivals E., Schackwitz W., Van de Peer Y., Piganeau G.;
RT "An improved genome of the model marine alga Ostreococcus tauri unfolds by
RT assessing Illumina de novo assemblies.";
RL BMC Genomics 15:1103-1103(2014).
RN [4] {ECO:0000313|EMBL:OUS43608.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RCC 1115 {ECO:0000313|EMBL:OUS43608.1};
RG DOE Joint Genome Institute;
RA Blanc-Mathieu R., Krasovec M., Hebrard M., Yau S., Desgranges E.,
RA Martin J., Schackwitz W., Kuo A., Salin G., Donnadieu C., Desdevises Y.,
RA Sanchez-Ferandin S., Moreau H., Rivals E., Grigoriev I.V., Grimsley N.,
RA Eyre-Walker A., Piganeau G.;
RT "Population genomics of picophytoplankton unveils novel chromosome
RT hypervariability.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CAID01000011; CEF99582.1; -; Genomic_DNA.
DR EMBL; KZ155831; OUS43608.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A090MA28; -.
DR STRING; 70448.A0A090MA28; -.
DR InParanoid; A0A090MA28; -.
DR OrthoDB; 306942at2759; -.
DR Proteomes; UP000009170; Chromosome 11.
DR Proteomes; UP000195557; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR044977; RLT1-3.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR PANTHER; PTHR36968:SF5; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR PROSITE; PS51913; HTH_HARE; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000313|EMBL:CEF99582.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000009170};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 115..183
FT /note="HTH HARE-type"
FT /evidence="ECO:0000259|PROSITE:PS51913"
FT REGION 71..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 186..233
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..91
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..233
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 322 AA; 35661 MW; 0CFF1CF13D1B2974 CRC64;
MTLAPASPLE SVGWYLSLYW PAMQKEFKGI VQRYDADSRH HTVRWDNAPR GSDGVTEVDL
SEGELTWLKP PEKAGAKKSA KSSSKSDVKV SKPKMTKVYD ESETMEDLEA RFTGKTTKAV
AFQVLKNSGP QGMSLQEIVD ESQKLGLRDW TTCKQPKTTI NVCVSQDPAF VKIAPGRVGL
RVNGAEEPSG ASYAAKAASK ANGNAMKKRG RPPRHDGKSK KAPRHEPQHW ERKPPIDLVL
EVTSDDGKFI SNSPMEVPFN ITIKALKRAI SANTKGALKP QYQQIFHESR NIGNDEDAFL
VHAVRPSKFE RSLHLKLVIG ET
//
