ID A0A090VDP1_9FLAO Unreviewed; 877 AA.
AC A0A090VDP1;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=HTH luxR-type domain-containing protein {ECO:0000259|SMART:SM00421};
GN ORFNames=JCM19300_2959 {ECO:0000313|EMBL:GAL62208.1};
OS Algibacter lectus.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Algibacter.
OX NCBI_TaxID=221126 {ECO:0000313|EMBL:GAL62208.1, ECO:0000313|Proteomes:UP000029644};
RN [1] {ECO:0000313|EMBL:GAL62208.1, ECO:0000313|Proteomes:UP000029644}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 19300 {ECO:0000313|EMBL:GAL62208.1,
RC ECO:0000313|Proteomes:UP000029644};
RA Takatani N., Nakanishi M., Meirelles P., Mino S., Suda W., Oshima K.,
RA Hattori M., Ohkuma M., Hosokawa M., Miyashita K., Thompson F.L., Niwa A.,
RA Sawabe T., Sawabe T.;
RT "Draft Genome Sequences of Marine Flavobacterium Algibacter lectus Strains
RT SS8 and NR4.";
RL Genome Announc. 2:e01168-14(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAL62208.1}.
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DR EMBL; BBNQ01000005; GAL62208.1; -; Genomic_DNA.
DR RefSeq; WP_052415285.1; NZ_BBNQ01000005.1.
DR AlphaFoldDB; A0A090VDP1; -.
DR OrthoDB; 1090267at2; -.
DR Proteomes; UP000029644; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR011110; Reg_prop.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR011123; Y_Y_Y.
DR Pfam; PF00196; GerE; 1.
DR Pfam; PF07494; Reg_prop; 1.
DR Pfam; PF07495; Y_Y_Y; 1.
DR SMART; SM00421; HTH_LUXR; 1.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000029644};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 675..699
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 817..874
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|SMART:SM00421"
SQ SEQUENCE 877 AA; 101481 MW; 4C0CD2E6D340BA59 CRC64;
MEFNGAKWNL YHSPKETIIR SVKVIDSLVY TGSFRGFGSW KRDRLGLLKY TSLSEALQVE
FLEDEEVWNI LRLEDWILFQ SLDRIHIYDQ VKKTYSVVDS KSKMSKLFKV GKRLYFQNVN
KGLYQIENGV DVLVSSDVIL QDNLIVNVFR QDEALLILTQ DRGFFKYSNG ELEPWTIPSE
HVLDGVSVFS GIQLRDQSFV LGTISNGLIH LTNEGHVKYS INQSNGLSNN TVLSLFEDED
QNIWLGLDNG INCINSKSPY LQYFDNDGMI GSVYASKVYK GMLYLGSNQG LFCKPVNSID
KFEFVPKTQG QVWCLEVVDG KLFCGHNSGT FLVEDKQVEK ISNAQGTWQI KTVPGRKDLL
MQGNYDGFNI LEKVDGNWTF RNKIEGFDIS SRYFEFIDLQ HILVSHEYKG VFKVEVDSAL
HNALSFKKDE LVEKGLTSSF VKFNDELLYT TKNGVFKYHN TSNAFKKDTL LSRLIHFDSY
SSGKLIPDLE TNKLWSLSTT GLDYLTVSKL TGEQKIESII FPSEVRKDIT GFENITHIAE
EQFLIGSATG YFIFDLKKIE SYPSEISINQ VEVSSSKDEN TFRFVDLNSS QSFLNNDNNL
KFSYSIPQYL KIQKPEYQYK LDGFYDTWSN WSSSGEVLFE NLPYGDYTFV VNGRVGKSET
QNSASYTFRI ERPLFLSNMA LLGYVVLIML FSFFMHMVYK RYYKKQRERL LRKKTREFEL
KELENNQKLM RFKNDKLRED IEAKNRELGM STMNLIKKNE FLNSLKKELT SVEDGKALKH
VIKIIDKNIN NTDDWNLFQE AFNNADKDFL KKIKQLHPSL TANDLRLCAY LRLNLSSKEI
APLLNISPRS VEVKRYRLRK KMELAHETSL TNYILEL
//