GenomeNet

Database: UniProt
Entry: A0A090VDP1_9FLAO
LinkDB: A0A090VDP1_9FLAO
Original site: A0A090VDP1_9FLAO 
ID   A0A090VDP1_9FLAO        Unreviewed;       877 AA.
AC   A0A090VDP1;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   24-JAN-2024, entry version 32.
DE   RecName: Full=HTH luxR-type domain-containing protein {ECO:0000259|SMART:SM00421};
GN   ORFNames=JCM19300_2959 {ECO:0000313|EMBL:GAL62208.1};
OS   Algibacter lectus.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Algibacter.
OX   NCBI_TaxID=221126 {ECO:0000313|EMBL:GAL62208.1, ECO:0000313|Proteomes:UP000029644};
RN   [1] {ECO:0000313|EMBL:GAL62208.1, ECO:0000313|Proteomes:UP000029644}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 19300 {ECO:0000313|EMBL:GAL62208.1,
RC   ECO:0000313|Proteomes:UP000029644};
RA   Takatani N., Nakanishi M., Meirelles P., Mino S., Suda W., Oshima K.,
RA   Hattori M., Ohkuma M., Hosokawa M., Miyashita K., Thompson F.L., Niwa A.,
RA   Sawabe T., Sawabe T.;
RT   "Draft Genome Sequences of Marine Flavobacterium Algibacter lectus Strains
RT   SS8 and NR4.";
RL   Genome Announc. 2:e01168-14(2014).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAL62208.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; BBNQ01000005; GAL62208.1; -; Genomic_DNA.
DR   RefSeq; WP_052415285.1; NZ_BBNQ01000005.1.
DR   AlphaFoldDB; A0A090VDP1; -.
DR   OrthoDB; 1090267at2; -.
DR   Proteomes; UP000029644; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR011110; Reg_prop.
DR   InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR   InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR011123; Y_Y_Y.
DR   Pfam; PF00196; GerE; 1.
DR   Pfam; PF07494; Reg_prop; 1.
DR   Pfam; PF07495; Y_Y_Y; 1.
DR   SMART; SM00421; HTH_LUXR; 1.
DR   SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029644};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        675..699
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          817..874
FT                   /note="HTH luxR-type"
FT                   /evidence="ECO:0000259|SMART:SM00421"
SQ   SEQUENCE   877 AA;  101481 MW;  4C0CD2E6D340BA59 CRC64;
     MEFNGAKWNL YHSPKETIIR SVKVIDSLVY TGSFRGFGSW KRDRLGLLKY TSLSEALQVE
     FLEDEEVWNI LRLEDWILFQ SLDRIHIYDQ VKKTYSVVDS KSKMSKLFKV GKRLYFQNVN
     KGLYQIENGV DVLVSSDVIL QDNLIVNVFR QDEALLILTQ DRGFFKYSNG ELEPWTIPSE
     HVLDGVSVFS GIQLRDQSFV LGTISNGLIH LTNEGHVKYS INQSNGLSNN TVLSLFEDED
     QNIWLGLDNG INCINSKSPY LQYFDNDGMI GSVYASKVYK GMLYLGSNQG LFCKPVNSID
     KFEFVPKTQG QVWCLEVVDG KLFCGHNSGT FLVEDKQVEK ISNAQGTWQI KTVPGRKDLL
     MQGNYDGFNI LEKVDGNWTF RNKIEGFDIS SRYFEFIDLQ HILVSHEYKG VFKVEVDSAL
     HNALSFKKDE LVEKGLTSSF VKFNDELLYT TKNGVFKYHN TSNAFKKDTL LSRLIHFDSY
     SSGKLIPDLE TNKLWSLSTT GLDYLTVSKL TGEQKIESII FPSEVRKDIT GFENITHIAE
     EQFLIGSATG YFIFDLKKIE SYPSEISINQ VEVSSSKDEN TFRFVDLNSS QSFLNNDNNL
     KFSYSIPQYL KIQKPEYQYK LDGFYDTWSN WSSSGEVLFE NLPYGDYTFV VNGRVGKSET
     QNSASYTFRI ERPLFLSNMA LLGYVVLIML FSFFMHMVYK RYYKKQRERL LRKKTREFEL
     KELENNQKLM RFKNDKLRED IEAKNRELGM STMNLIKKNE FLNSLKKELT SVEDGKALKH
     VIKIIDKNIN NTDDWNLFQE AFNNADKDFL KKIKQLHPSL TANDLRLCAY LRLNLSSKEI
     APLLNISPRS VEVKRYRLRK KMELAHETSL TNYILEL
//
DBGET integrated database retrieval system