ID A0A091FNN3_CORBR Unreviewed; 868 AA.
AC A0A091FNN3;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=DNA polymerase kappa {ECO:0000256|ARBA:ARBA00016178};
GN ORFNames=N302_11254 {ECO:0000313|EMBL:KFO62920.1};
OS Corvus brachyrhynchos (American crow).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae;
OC Corvus.
OX NCBI_TaxID=85066 {ECO:0000313|EMBL:KFO62920.1, ECO:0000313|Proteomes:UP000052976};
RN [1] {ECO:0000313|EMBL:KFO62920.1, ECO:0000313|Proteomes:UP000052976}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N302 {ECO:0000313|EMBL:KFO62920.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KK719351; KFO62920.1; -; Genomic_DNA.
DR RefSeq; XP_008636830.1; XM_008638608.2.
DR RefSeq; XP_017596181.1; XM_017740692.1.
DR RefSeq; XP_017596182.1; XM_017740693.1.
DR RefSeq; XP_017596184.1; XM_017740695.1.
DR AlphaFoldDB; A0A091FNN3; -.
DR STRING; 85066.A0A091FNN3; -.
DR GeneID; 103620023; -.
DR KEGG; cbrc:103620023; -.
DR CTD; 51426; -.
DR OrthoDB; 146204at2759; -.
DR Proteomes; UP000052976; Unassembled WGS sequence.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd03586; PolY_Pol_IV_kappa; 1.
DR Gene3D; 1.10.150.810; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.1170.60; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR HAMAP; MF_01113; DNApol_IV; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR022880; DNApol_IV.
DR InterPro; IPR024728; PolY_HhH_motif.
DR InterPro; IPR006642; Rad18_UBZ4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR11076:SF33; DNA POLYMERASE KAPPA; 1.
DR PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR Pfam; PF11798; IMS_HHH; 1.
DR SMART; SM00734; ZnF_Rad18; 2.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR PROSITE; PS50173; UMUC; 1.
DR PROSITE; PS51908; ZF_UBZ4; 2.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763, ECO:0000256|PROSITE-
KW ProRule:PRU01256};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204, ECO:0000256|PROSITE-
KW ProRule:PRU01256}; DNA synthesis {ECO:0000256|ARBA:ARBA00022634};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000052976};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU01256}.
FT DOMAIN 104..351
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
FT DOMAIN 612..642
FT /note="UBZ4-type"
FT /evidence="ECO:0000259|PROSITE:PS51908"
FT DOMAIN 768..798
FT /note="UBZ4-type"
FT /evidence="ECO:0000259|PROSITE:PS51908"
FT REGION 649..718
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 833..857
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 681..705
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 868 AA; 98557 MW; D3D0EDA6AF33D9A8 CRC64;
MDDMKKAANS SCNDGVLLRM GLNDNKAGMQ GLDKEKINKI IMDATKGSRF YENELKKDQQ
VNQRIEKMMQ LKEKVTTQQL LKAQLQVDKL VIELERSRNL SSTIVHIDMD AFYAAVEMRD
NPELKEKPIA VGSMSMLSTS NYHARRFGVR AAMPGFIAKR LCPHLTIVPL NFEKYSKVSK
EVREILAEYD PNFMPMGLDE AYLNITEHLE ERLNWPEDRR RFFFNTESTT RIDKDGMNMS
AKFNEGEVSS SPVLFEDNTS LMDDGFEQRG LSVENSVVFG TSAEEVVKEI RFRIEQKTQL
TASAGIAPNT MLAKMCSDRN KPNGQYRISP ERQAVLDFLK DLPIRKVPGI GKVTEKMLKA
LGIVTCSELY QQRALLSLLF SEVSWRNFLD ISLGLGSTHL EKDGERKSMS TERTFSEINT
AEDQYNLCRE LCRDLAQDLQ KEGLKGKTVT LKLKNVNFEV KTRASTVLSS VSTEEEIFAV
AKDLLGTEID SVAPHPLRIR LMGVRVSGFL TEEEKKYQQR SITSFLKSGK EIGFLRLQPE
KSNQEYFTKN SEASHRGSFF DQKRAARQLN SENISPNESR GKQLFHDDKS SANFVEERKK
VTDLQNSNAR EIFTCPVCFE EQSSNNLEEL NRHIDECLSG MHVKDTVEIS KNDSSRENTP
NFLPQFKNEH VDEREKNNTD QLAGTDQSAN VSDSSTNNST EKFGQIIPDK SPRERQPSNL
SDIVRNMCMK QCLFPKRISQ DNEDHFDKTE QIEGTSSSHF FDTKEDTALV CPVCNSEQKT
TNLVSFNRHV DVCLNKGLIQ ELTEKEDFPT KTYNMENSNR VFSGCLSKGQ QCANPSQGTK
RSGLTASQSV SKKAKSSNSK HTIEMFFK
//
