ID A0A091FPY1_9AVES Unreviewed; 1728 AA.
AC A0A091FPY1;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Trinucleotide repeat-containing gene 6C protein {ECO:0000313|EMBL:KFO71658.1};
DE Flags: Fragment;
GN ORFNames=N303_12317 {ECO:0000313|EMBL:KFO71658.1};
OS Cuculus canorus (common cuckoo).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus.
OX NCBI_TaxID=55661 {ECO:0000313|EMBL:KFO71658.1, ECO:0000313|Proteomes:UP000053760};
RN [1] {ECO:0000313|EMBL:KFO71658.1, ECO:0000313|Proteomes:UP000053760}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N303 {ECO:0000313|EMBL:KFO71658.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the GW182 family.
CC {ECO:0000256|ARBA:ARBA00007302}.
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DR EMBL; KL447270; KFO71658.1; -; Genomic_DNA.
DR STRING; 55661.A0A091FPY1; -.
DR Proteomes; UP000053760; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR CDD; cd12713; RRM_TNRC6C; 1.
DR CDD; cd14283; UBA_TNR6C; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR InterPro; IPR019486; Argonaute_hook_dom.
DR InterPro; IPR026805; GW182_M_dom.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR041917; TNR6C_UBA.
DR InterPro; IPR032226; TNRC6_PABC-bd.
DR InterPro; IPR034927; TNRC6C_RRM.
DR InterPro; IPR015940; UBA.
DR InterPro; IPR009060; UBA-like_sf.
DR PANTHER; PTHR13020; TRINUCLEOTIDE REPEAT-CONTAINING GENE 6; 1.
DR PANTHER; PTHR13020:SF9; TRINUCLEOTIDE REPEAT-CONTAINING GENE 6C PROTEIN; 1.
DR Pfam; PF10427; Ago_hook; 1.
DR Pfam; PF12938; M_domain; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF16608; TNRC6-PABC_bdg; 2.
DR Pfam; PF00627; UBA; 1.
DR SMART; SM00165; UBA; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS50030; UBA; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000053760};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 974..1019
FT /note="UBA"
FT /evidence="ECO:0000259|PROSITE:PS50030"
FT REGION 18..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 207..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 278..730
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 820..971
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1123..1147
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1258..1418
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1438..1461
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1507..1529
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1635..1665
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1224..1255
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 25..78
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 278..292
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 301..343
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 377..462
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 494..511
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 528..578
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 587..651
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 669..730
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 820..836
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 855..879
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 924..971
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1289..1304
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1311..1365
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1385..1399
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1636..1665
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFO71658.1"
FT NON_TER 1728
FT /evidence="ECO:0000313|EMBL:KFO71658.1"
SQ SEQUENCE 1728 AA; 180675 MW; 4ED976EF02068848 CRC64;
SEGNCSWDKV IIDRTDKEAW PSITGAETES ASECTTDTDS ASNCGSENSS MATGSAQGNF
TGHTKKTNGN NGANGALVQS TSNQSALGAG GANGNGNSAR VWGMAAGSSS GLAHCSASGG
DGKMDNMMGD SRSQNCWGAS NSNAGINLNL NPNANPAAWP VLGHEGTVGA GNPSSICSPV
SAIGQNMGNQ NGNPTGTLGA WGNLLPQEST EPQTSTSQNV SFSVQPQNLN TDGPNNTNPM
NSSPNPINAM QTNGLPNWGM AVGMGAIIPP HLQGLPGANG TSVSQVSGGS GEGMGSSVWG
MSPGNPATGN SNSGFSQGNG DTVNSALSAK QNGSSSAVQK EGNGASAWDS GPPSGPGVLA
WGRGGGNGGV GSMHSGAWGH SNRNTSNGVN SEWGKAPNQH SNSDINGKGS TGWDSSSITS
PNPAMQQGNE QINSWAKAAA SGTTASEGSN DSGGSQNEGS TGREGAGEGR RRDKGMIDQG
QVQLPRNDLD PRVLSNTGWG QTPVKQNTAW EFEESPRSER KNDNGTEAWG CAATQSSNSG
GKNDGSIMNS TNTSSVSGWV NSPPAAVPTN TGWGDNNNKA PNGPAGWGES ASSTTVNNAA
AAKSGHAWTG TANQEDKSPT WGEPQKPKSQ NWGDGQKSNA SWTSGGGDWT DSSSVPGHLG
DGKKNGSGWD SDSRSGSGWN DSTRSGTSGW GNGTNSKANT GTSWGESLKL GPQQNWANKP
QDNNVSNWGG AASVKQTGSG WVGGPVPAKQ KENCEATGWE EPSPPSIRRK MEIDDGTSAW
GDPNYNNNKT VNMWDRNNPI IQSSTTTNTT TTSTIINSNM VEPQPSHQSS AQPNRSPLLG
PAGWGEMPTV HTKTEASWGE PSSPSAAVDN GTSAWGKPPS SGTGWGDNPA EPAGTYGRTN
APAAAPALCK PASKSMQEGW GSGGDEVNLS TSQWEDEEGD MWNNTASQES SSSCNSWGNA
PKKGLQKGMK TSSKQDEAWI MNRLIKQLTD MGFPREPAEE ALKSNNMNLD QAMSALLEKK
VEMDKRGMGV TDYNGIVTKP LGCRPPPISK ESSMDRPTFL DKDGGLVEEP TTSPFLPSPS
LKLPLSNSAL PNQTLGGIAS GLGMQNLNSS RQIPSGNLGM FGNSGAAQAR TMQQPQQPPV
QPLNSSQPSL RAQVPQFLSP QVQAQLLQFA AKNIGLSPAQ LTSPINNPQH MTMLNQLYQL
QLAYQRLQIQ QQMLQAQRNV SGPMRQQEQQ VARTINNMQQ QIQQHQRQLA QALLMKQQPP
PPHLSLHPSA GKSAMDSFSP HPQAPGLPDL QTKEQQSSPN TFAPYPLAGL NPNMNVNNMD
ITGGLSVKDT SQSQSRLPQW THPNSMDNLS SAASSLDQNS SKHGAVPGGL SIGPPGKSSI
DDSYGRYDLI QNSESPASPP VAVPHSWSRA KTDSDKISNG SSINWPPEFH PGVPWKGLQN
IDPENDPDVT PGSVPTGPTI NTTIQDVNRY LLKSGGKLSD IKSTWSSGPI SHTQASLSHE
LWKVPRNTTA PTRPPPGLTN TKPSSTWGAS PLGWTSSYSS GSAWSTDSSG RTSSWLVLRN
LTPQIDGSTL RTLCLQHGPL ITFHLNLTQG NAVVRYSSKE EAAKAQKSLH MCVLGNTTIL
AEFAGEEEVN RFLAQGQPLP PTSSWQSNTG TNQTRLGSSS SSHGLVRTDA GHWNPPCQKN
QQRPVVGGVP QYSSSLWGPP SADDGRVIGS PTPLNTLLPG DLLSGESI
//
