ID A0A091H4R3_9AVES Unreviewed; 668 AA.
AC A0A091H4R3;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=RNA polymerase II-associated protein 3 {ECO:0000256|ARBA:ARBA00040133};
DE Flags: Fragment;
GN ORFNames=N303_13139 {ECO:0000313|EMBL:KFO81262.1};
OS Cuculus canorus (common cuckoo).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus.
OX NCBI_TaxID=55661 {ECO:0000313|EMBL:KFO81262.1, ECO:0000313|Proteomes:UP000053760};
RN [1] {ECO:0000313|EMBL:KFO81262.1, ECO:0000313|Proteomes:UP000053760}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N303 {ECO:0000313|EMBL:KFO81262.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RPAP3 family.
CC {ECO:0000256|ARBA:ARBA00038275}.
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DR EMBL; KL448195; KFO81262.1; -; Genomic_DNA.
DR RefSeq; XP_009566108.1; XM_009567813.1.
DR AlphaFoldDB; A0A091H4R3; -.
DR STRING; 55661.A0A091H4R3; -.
DR GeneID; 104065349; -.
DR KEGG; cuca:104065349; -.
DR CTD; 79657; -.
DR OrthoDB; 2294768at2759; -.
DR Proteomes; UP000053760; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR025986; RPAP3-like_C.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR46423; RNA POLYMERASE II-ASSOCIATED PROTEIN 3; 1.
DR PANTHER; PTHR46423:SF1; RNA POLYMERASE II-ASSOCIATED PROTEIN 3; 1.
DR Pfam; PF13877; RPAP3_C; 1.
DR Pfam; PF13432; TPR_16; 1.
DR Pfam; PF13181; TPR_8; 2.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50005; TPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000053760};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 133..166
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 201..234
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 284..317
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 352..385
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 547..637
FT /note="RNA-polymerase II-associated protein 3-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF13877"
FT REGION 39..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 106..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 511..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 511..526
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 668
FT /evidence="ECO:0000313|EMBL:KFO81262.1"
SQ SEQUENCE 668 AA; 76380 MW; 9D588AF1362733A9 CRC64;
MSAPNKSLEL QLQMKQNAEE LQDFMRELES WEKDIKEVDS ELRKRSGVPE ENLPPIRNKA
FKKKKKSKSK VPSKITSEEN KKNKIKSYDY EAWGKLDVDK ILEELDKEDS THDSVSPESD
SEEDGIRIDA EKALAEKEKG NHYFKQGNFD EAIKCYTRGM HSDPYNPVLP TNRASAFYRM
KKFSVAESDC NLALALDKNY TKAYSRRGAA RFALKNLQGA KEDYEKVLEL DANNFEAKNE
LKKINQALSS KESSEQKEFE VAGRPELTDK EKKCIEDQQL KQKAIIEKDL GNGYFKEGKY
EAAIECYTRG IAADGTNALL PANRAMAYLK IEKYEEAEDD CTQALLLDAS YSKAFARRGA
ARVALGKLKE AVQDFEAVLK LEPGNKQAIN ELTKIKKELA EKEQETHQEY PTVLIKEWEI
KNIVKVIDNP LHLKSTKPLQ RIPIEEIDDD TPNSDMPSTT SLVNNWTIST RVETTENLGL
DDQLATMDIP KAKHLKIEEI SDTLPVQLSD SMKGTSSVLH PSLPVNQQRE KETKRSFQSA
TPVPPVPANS FQLESDFRKF KDCPENMYLY LKQIEPSLYP KLFQKSLDPD LFNQILKILH
DFYIEKEEPS LILEILQKLS ELKRFDMAVM FMSGLEKKIT QVLFNHVNQM GLKDTSVKEL
EKKYGILS
//
