ID A0A091I9X6_CALAN Unreviewed; 491 AA.
AC A0A091I9X6;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Polypyrimidine tract-binding protein 1 {ECO:0000256|ARBA:ARBA00019540};
DE Flags: Fragment;
GN ORFNames=N300_02504 {ECO:0000313|EMBL:KFP05032.1};
OS Calypte anna (Anna's hummingbird) (Archilochus anna).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes;
OC Trochilidae; Calypte.
OX NCBI_TaxID=9244 {ECO:0000313|EMBL:KFP05032.1, ECO:0000313|Proteomes:UP000054308};
RN [1] {ECO:0000313|EMBL:KFP05032.1, ECO:0000313|Proteomes:UP000054308}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N300 {ECO:0000313|EMBL:KFP05032.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KL218432; KFP05032.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A091I9X6; -.
DR STRING; 9244.A0A091I9X6; -.
DR Proteomes; UP000054308; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12777; RRM1_PTBP1; 1.
DR CDD; cd12701; RRM4_PTBP1; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035000; PTBP1_RRM1.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 2.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF19; POLYPYRIMIDINE TRACT-BINDING PROTEIN 1; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 2.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 4.
DR PROSITE; PS50102; RRM; 4.
PE 4: Predicted;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054308};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Ubl conjugation {ECO:0000256|ARBA:ARBA00022843}.
FT DOMAIN 27..111
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 146..222
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 297..371
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 414..489
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFP05032.1"
FT NON_TER 491
FT /evidence="ECO:0000313|EMBL:KFP05032.1"
SQ SEQUENCE 491 AA; 53742 MW; E2BCB386751946DF CRC64;
NSSFFTANGN DSKKFKGDNR IAGVTSRVIH VRKLPSDVTE AEVISLGLPF GKITNLLMLK
GKNQAFIEMN TEEAANTMVN YYTTVTPVLR NQPIYIQFSN HKELKTDNSP NQARAQAALQ
AVTAVQNAAP AAVDAGMAMA GQSPVLRIII ENLFYPVALD VLHQIFSKFG TVLKIIMFTK
NHQFQALLQY ADPLSAQHAK LSLDGQNIYN ACCTLRIDFS KLTSLNVKYN NDKSRDYTRP
DLPSGDNQPT LDQTMAAAFG LTIPNVHGAL PPLAIPAAAA AAAGRIAIPG LTGAGNPVLL
VSNLNSEVIT PQCLFILFGV YGDVQRVKIL FKKKENALVQ MTDGNQAQLA MSHLNGQKLL
GKPIRITLSK HQTVQLPRDG QEDNGLTKDY GNSPLHRFKK PGSKNFQNIF PPSATLHLSN
IPPSITEEDL KMLFSSNGGM VKGFKFFQKD RKMALIQMGS VEEAIQSLID LHNHDLGENH
HLRVSFSKST I
//
