ID A0A091M5Y4_CARIC Unreviewed; 522 AA.
AC A0A091M5Y4;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Poly(U)-binding-splicing factor PUF60 {ECO:0000313|EMBL:KFP66137.1};
DE Flags: Fragment;
GN ORFNames=N322_10982 {ECO:0000313|EMBL:KFP66137.1};
OS Cariama cristata (Red-legged seriema).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Cariamiformes; Cariamidae; Cariama.
OX NCBI_TaxID=54380 {ECO:0000313|EMBL:KFP66137.1, ECO:0000313|Proteomes:UP000054116};
RN [1] {ECO:0000313|EMBL:KFP66137.1, ECO:0000313|Proteomes:UP000054116}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N322 {ECO:0000313|EMBL:KFP66137.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the RRM half pint family.
CC {ECO:0000256|ARBA:ARBA00005987}.
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DR EMBL; KK520237; KFP66137.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A091M5Y4; -.
DR Proteomes; UP000054116; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12370; RRM1_PUF60; 1.
DR CDD; cd12371; RRM2_PUF60; 1.
DR CDD; cd12648; RRM3_UHM_PUF60; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR006532; PUF60-like.
DR InterPro; IPR034209; PUF60_RRM1.
DR InterPro; IPR034211; PUF60_RRM2.
DR InterPro; IPR034212; PUF60_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR NCBIfam; TIGR01645; half-pint; 1.
DR PANTHER; PTHR47330:SF1; POLY(U)-BINDING-SPLICING FACTOR PUF60; 1.
DR PANTHER; PTHR47330; POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATED; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 3.
DR SMART; SM00361; RRM_1; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 3.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054116};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 92..170
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 189..267
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 425..512
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFP66137.1"
FT NON_TER 522
FT /evidence="ECO:0000313|EMBL:KFP66137.1"
SQ SEQUENCE 522 AA; 56395 MW; BF062EFD850C27AE CRC64;
GTESIKMENG QSTAAKLGLP PLTPEQQEAL QKAKKYAMEQ SIKSVLVKQT IAHQQQQLTN
LQMAAVTMGF GDPLSPLQSM AAQRQRALAI MCRVYVGSIY YELGEDTIRQ AFAPFGPIKS
IDMSWDSVTM KHKGFAFVEY EVPEAAQLAL EQMNSVMLGG RNIKVGRPSN IGQAQPIIDQ
LAEEARAFNR IYVASVHQDL SDDDIKSVFE AFGKIKSCTL ARDPTTGKHK GYGFIEYEKA
QSSQDAVSSM NLFDLGGQYL RVGKAVTPPM PLLTPATPGG LPPAAAVAAA AATAKITAQE
AVAGAAVLGT LATPGLVSPA LTLAQPLGAL PQAVMAAQAP GVITGVTPAR PPIPVTIPQV
GVVNPILASP PALGLMEVKK EKEEEEVFQE SERPEMLSEQ EHMSISGSSA RHMVMQKLLR
KQESTVMVLR NMVDPKDIDD DLEGEVTEEC GKFGAVNRVI IYQEKQGEEE DAEIIVKIFV
EFSMASETHK AIQALNGRWF AGRKVVAEVY DQERFDNSDL SA
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