ID A0A091T945_PHALP Unreviewed; 602 AA.
AC A0A091T945;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Semaphorin-4D {ECO:0000313|EMBL:KFQ70305.1};
DE Flags: Fragment;
GN ORFNames=N335_08709 {ECO:0000313|EMBL:KFQ70305.1};
OS Phaethon lepturus (White-tailed tropicbird).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Eurypygimorphae; Phaethontiformes;
OC Phaethontidae; Phaethon.
OX NCBI_TaxID=97097 {ECO:0000313|EMBL:KFQ70305.1, ECO:0000313|Proteomes:UP000053638};
RN [1] {ECO:0000313|EMBL:KFQ70305.1, ECO:0000313|Proteomes:UP000053638}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N335 {ECO:0000313|EMBL:KFQ70305.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the semaphorin family.
CC {ECO:0000256|ARBA:ARBA00009492}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00352}.
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DR EMBL; KK441355; KFQ70305.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A091T945; -.
DR PhylomeDB; A0A091T945; -.
DR Proteomes; UP000053638; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0030215; F:semaphorin receptor binding; IEA:InterPro.
DR GO; GO:0016043; P:cellular component organization; IEA:UniProt.
DR CDD; cd05873; Ig_Sema4D_like; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 3.30.1680.10; ligand-binding face of the semaphorins, domain 2; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR013151; Immunoglobulin.
DR InterPro; IPR002165; Plexin_repeat.
DR InterPro; IPR016201; PSI.
DR InterPro; IPR001627; Semap_dom.
DR InterPro; IPR036352; Semap_dom_sf.
DR InterPro; IPR027231; Semaphorin.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR11036; SEMAPHORIN; 1.
DR PANTHER; PTHR11036:SF18; SEMAPHORIN-4D; 1.
DR Pfam; PF00047; ig; 1.
DR Pfam; PF01437; PSI; 1.
DR Pfam; PF01403; Sema; 1.
DR SMART; SM00409; IG; 1.
DR SMART; SM00423; PSI; 1.
DR SMART; SM00630; Sema; 1.
DR SUPFAM; SSF48726; Immunoglobulin; 1.
DR SUPFAM; SSF103575; Plexin repeat; 1.
DR SUPFAM; SSF101912; Sema domain; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
DR PROSITE; PS51004; SEMA; 1.
PE 3: Inferred from homology;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000053638};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 478..500
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..243
FT /note="Sema"
FT /evidence="ECO:0000259|PROSITE:PS51004"
FT DOMAIN 312..378
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT REGION 538..584
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFQ70305.1"
FT NON_TER 602
FT /evidence="ECO:0000313|EMBL:KFQ70305.1"
SQ SEQUENCE 602 AA; 67126 MW; 82DCD2A7B0D39962 CRC64;
KRDQGGLRTL QKKWTSFLKA RLICTIPDKN LIFNIINDVF ILKSPTLKEP VIYGVFTPQL
NNVGLSAVCA YNLSTVEEVF SKGKYMQSAT VEQSHTKWVR YNGEIPNPRP GACINNEARA
SNYMSTLNLP DKTLQFVKDH PLMDDSVTPM GDRPRLVKRD VKYTQIVVDR VRVLNGSIYD
VMFISTDRGA LHKAISYENG MHIIEETQLF PNFEPVQTLL LSSKKGRRYL YAGSNSGVVQ
SPVAFCDKYT TCVDCVLARD PYCAWKPLEA SCTDTFKENE IERNWIQNIG GDASSCSDKV
RENSLQHTFK HGSTAELKCS QKSNLAQVVW KFKDDVLRVE SPKYRLLEKA LLIFNLSEGD
SGVYQCLSEE KVKNKKFSQV LAKHVLELKK IQHTTVGPTA AAAPTEGNSD VPKVSAVSTE
GSTAHTSTTQ MVPVTTARVV TKPIGPVLTS AASNTELFNS IPDAVPEKTM FLKSNDNFLL
MFLFLFFFIL FLCLLSYNCY KGYLPGQCLK FRALILLGKK KTKSDFSDCE QSVKETLVEQ
GSVSHQSGEQ PKPAHDTGYE TEPDCGNGHL QPGDSQASRE AKDKPFDVKC ELKYADSDAE
GD
//
