ID A0A093ETP6_GAVST Unreviewed; 348 AA.
AC A0A093ETP6;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Leucine-rich repeat and transmembrane domain-containing protein 2 {ECO:0000313|EMBL:KFV48672.1};
DE Flags: Fragment;
GN ORFNames=N328_06639 {ECO:0000313|EMBL:KFV48672.1};
OS Gavia stellata (Red-throated diver) (Colymbus stellatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia.
OX NCBI_TaxID=37040 {ECO:0000313|EMBL:KFV48672.1, ECO:0000313|Proteomes:UP000054313};
RN [1] {ECO:0000313|EMBL:KFV48672.1, ECO:0000313|Proteomes:UP000054313}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N328 {ECO:0000313|EMBL:KFV48672.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SLITRK family.
CC {ECO:0000256|ARBA:ARBA00010439}.
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DR EMBL; KK616083; KFV48672.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093ETP6; -.
DR Proteomes; UP000054313; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007409; P:axonogenesis; IEA:InterPro.
DR GO; GO:1905606; P:regulation of presynapse assembly; IEA:InterPro.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR000372; LRRNT.
DR InterPro; IPR043326; Slitrk.
DR PANTHER; PTHR45773:SF7; SLIT AND NTRK-LIKE PROTEIN 1; 1.
DR PANTHER; PTHR45773; SLIT AND NTRK-LIKE PROTEIN 4-RELATED; 1.
DR Pfam; PF13855; LRR_8; 1.
DR Pfam; PF01462; LRRNT; 1.
DR SMART; SM00369; LRR_TYP; 4.
DR SMART; SM00082; LRRCT; 1.
DR SMART; SM00013; LRRNT; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR PROSITE; PS51450; LRR; 2.
PE 3: Inferred from homology;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000054313};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius, ECO:0000313|EMBL:KFV48672.1};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 285..318
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 16..50
FT /note="LRRNT"
FT /evidence="ECO:0000259|SMART:SM00013"
FT DOMAIN 176..229
FT /note="LRRCT"
FT /evidence="ECO:0000259|SMART:SM00082"
FT REGION 239..270
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 329..348
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 239..268
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFV48672.1"
FT NON_TER 348
FT /evidence="ECO:0000313|EMBL:KFV48672.1"
SQ SEQUENCE 348 AA; 38449 MW; 32D659DC0C789364 CRC64;
VLGCWLSLCA AESFFACPSS CKCNSGNLEV DCSGLGLSSI PSDIPTNTRT FLFLNNKLSI
LPGAVFSNLS ALQRLDLSNN FLDQLPQNIF SDLGNLTELQ LRNNSIRALD KDLLQHTALL
RQLDLSINGL AQIPSGIFDD LPALRSLSLR SNRLQSLDRV TFEPLTSLQQ LQVGDNPWEC
DCNLRDFKHW MEWFSYRGGK IDQLACTLPK ELKGKDMRMV PMEMFNYCSQ LDDENSSTVL
DNTGPPCTKG SPTPSKSKSG SETEVEPSVG CPQKQRYRPV SVRRAIGTVI IAGVVCGIVC
IMMVVAAAYG CIYASLMAKY HRELKKRQPL MGDTEGEHEE QKQISSVA
//
