ID A0A093H2S5_GAVST Unreviewed; 720 AA.
AC A0A093H2S5;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Semaphorin-5B {ECO:0000313|EMBL:KFV49033.1};
DE Flags: Fragment;
GN ORFNames=N328_04458 {ECO:0000313|EMBL:KFV49033.1};
OS Gavia stellata (Red-throated diver) (Colymbus stellatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia.
OX NCBI_TaxID=37040 {ECO:0000313|EMBL:KFV49033.1, ECO:0000313|Proteomes:UP000054313};
RN [1] {ECO:0000313|EMBL:KFV49033.1, ECO:0000313|Proteomes:UP000054313}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N328 {ECO:0000313|EMBL:KFV49033.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00352}.
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DR EMBL; KK616662; KFV49033.1; -; Genomic_DNA.
DR RefSeq; XP_009820178.1; XM_009821876.1.
DR AlphaFoldDB; A0A093H2S5; -.
DR KEGG; gste:104264701; -.
DR CTD; 54437; -.
DR OrthoDB; 5399685at2759; -.
DR Proteomes; UP000054313; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0030215; F:semaphorin receptor binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1680.10; ligand-binding face of the semaphorins, domain 2; 1.
DR Gene3D; 2.20.100.10; Thrombospondin type-1 (TSP1) repeat; 6.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR002165; Plexin_repeat.
DR InterPro; IPR016201; PSI.
DR InterPro; IPR001627; Semap_dom.
DR InterPro; IPR036352; Semap_dom_sf.
DR InterPro; IPR027231; Semaphorin.
DR InterPro; IPR000884; TSP1_rpt.
DR InterPro; IPR036383; TSP1_rpt_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR11036; SEMAPHORIN; 1.
DR PANTHER; PTHR11036:SF39; SEMAPHORIN-5B; 1.
DR Pfam; PF01437; PSI; 1.
DR Pfam; PF01403; Sema; 1.
DR Pfam; PF00090; TSP_1; 5.
DR PRINTS; PR01705; TSP1REPEAT.
DR SMART; SM00423; PSI; 1.
DR SMART; SM00209; TSP1; 6.
DR SUPFAM; SSF103575; Plexin repeat; 1.
DR SUPFAM; SSF101912; Sema domain; 1.
DR SUPFAM; SSF82895; TSP-1 type 1 repeat; 6.
DR PROSITE; PS51004; SEMA; 1.
DR PROSITE; PS50092; TSP1; 6.
PE 4: Predicted;
KW Differentiation {ECO:0000256|ARBA:ARBA00022782};
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Neurogenesis {ECO:0000256|ARBA:ARBA00022902};
KW Reference proteome {ECO:0000313|Proteomes:UP000054313};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 655..680
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..174
FT /note="Sema"
FT /evidence="ECO:0000259|PROSITE:PS51004"
FT REGION 695..720
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 695..713
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFV49033.1"
FT NON_TER 720
FT /evidence="ECO:0000313|EMBL:KFV49033.1"
SQ SEQUENCE 720 AA; 80337 MW; 2A9B1948FB02E13B CRC64;
NSIAASAVCA FNLSAITQAF NGPFRYQENP RSAWLPTLNP IPNFQCGTLS DDGPNENLTE
RVLQDAQRLF LMNDVVQPVT VDPYVTQDSI RFSKLVVDIV QGKDTLYHVM YIGTEYGTIL
KALSTTNRSL RNCYLEEMQI LPDGQREAIK SLQILHSDRS LFVGLNNGVL KIPLERCSMY
RTEGECLGAR DPYCGWDNKQ KRCTTIEDSS NMSLWTQNIT ECPVKNLTTN GRLGPWSPWQ
LCEHSDGDST GSCMCRSRSC DSPRPRCGGR GCEGARIEVA NCSRNGAWTP WSSWAPCSTS
CGIGFQVRQR SCSNPAPRYG GRVCVGQSRE ERFCNENSPC PLPIFWSSWG PWNKCSVNCG
GGIHSRQRSC ENGNTCPGCA VEYKTCNPES CPEVRRNTPW TPWMPVNITQ NGARQEQRFR
YTCRAQLSDP HELQFGRKKT ESRFCPNDGS AVCDTDSLVD DLLKTGKTSA RIINGGWSFW
GAWSSCSRDC ELGFRIRKRT CTNPEPKNGG LPCVGSAMEY QDCNPHPCPV KGSWSCWTPW
SHCSATCGGG HYQRTRTCTN PAPSSGEDIC IGLHTEEALC NTHPCEGGWS EWSEWSLCNE
EGIQYRSRYC EVHSPDSSQC VGNSTQYQDC LYNEIPVILP ASSIDESTNC GGFSLIHLIA
TGVSCFFGSS LLTFVIYVYC QRCQRQSQES TVIHPTTPNH LHYKGNTTPK NEKYTPMEFK
//
