ID A0A093QZD6_PHACA Unreviewed; 301 AA.
AC A0A093QZD6;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=RNA binding protein fox-1 2 {ECO:0000313|EMBL:KFW94223.1};
DE Flags: Fragment;
GN ORFNames=N336_03285 {ECO:0000313|EMBL:KFW94223.1};
OS Phalacrocorax carbo (Great cormorant) (Pelecanus carbo).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Suliformes; Phalacrocoracidae;
OC Phalacrocorax.
OX NCBI_TaxID=9209 {ECO:0000313|EMBL:KFW94223.1, ECO:0000313|Proteomes:UP000053238};
RN [1] {ECO:0000313|EMBL:KFW94223.1, ECO:0000313|Proteomes:UP000053238}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N336 {ECO:0000313|EMBL:KFW94223.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KL441038; KFW94223.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093QZD6; -.
DR Proteomes; UP000053238; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0007399; P:nervous system development; IEA:InterPro.
DR GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12407; RRM_FOX1_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR025670; Fox-1_C_dom.
DR InterPro; IPR034237; FOX1_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR017325; RBFOX1-3.
DR InterPro; IPR047131; RBFOX1-like.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR15597; ATAXIN 2-BINDING PROTEIN 1-RELATED; 1.
DR PANTHER; PTHR15597:SF31; RNA BINDING PROTEIN FOX-1 HOMOLOG 2; 1.
DR Pfam; PF12414; Fox-1_C; 1.
DR Pfam; PF00076; RRM_1; 1.
DR PIRSF; PIRSF037932; Ataxin_2_bd_A2BP; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000053238};
KW RNA-binding {ECO:0000256|PIRSR:PIRSR037932-1, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 104..180
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..110
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..31
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..106
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 105
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 113
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 114
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 138
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 143
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 147
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 171
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT SITE 181
FT /note="Interaction with RNA"
FT /evidence="ECO:0000256|PIRSR:PIRSR037932-1"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFW94223.1"
FT NON_TER 301
FT /evidence="ECO:0000313|EMBL:KFW94223.1"
SQ SEQUENCE 301 AA; 32270 MW; FDC573B5FA1FD432 CRC64;
QGNQEPAATP DAMVQPFTTI PFPPPPQNGI PTEYGVPHTQ DYAGQTSEHN LTLYGSTQPH
GEQSTNTAST QNGSLAQTEG GAQTDGQQSQ TQSSENTESK STPKRLHVSN IPFRFRDPDL
RQMFGQFGKI LDVEIIFNER GSKGFGFVTF ENSADADRAR EKLHGTVVEG RKIEVNNATA
RVMTNKKMVT PYANGWKLSP VVGAVYGPEL YAASSFQADV SLGNDAAVPL SGRGGINTYI
PLIIPGFPYP TAATTAAAFR GAHLRGRGRT VYGAVRAVPP TAIPAYPGVV YQDGFYGADL
Y
//
