ID A0A093R368_PHACA Unreviewed; 345 AA.
AC A0A093R368;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=U4/U6 small nuclear ribonucleoprotein Prp4 {ECO:0000313|EMBL:KFW93085.1};
DE Flags: Fragment;
GN ORFNames=N336_05524 {ECO:0000313|EMBL:KFW93085.1};
OS Phalacrocorax carbo (Great cormorant) (Pelecanus carbo).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Suliformes; Phalacrocoracidae;
OC Phalacrocorax.
OX NCBI_TaxID=9209 {ECO:0000313|EMBL:KFW93085.1, ECO:0000313|Proteomes:UP000053238};
RN [1] {ECO:0000313|EMBL:KFW93085.1, ECO:0000313|Proteomes:UP000053238}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGI_N336 {ECO:0000313|EMBL:KFW93085.1};
RA Zhang G., Li C.;
RT "Genome evolution of avian class.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KL436717; KFW93085.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A093R368; -.
DR Proteomes; UP000053238; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR Gene3D; 4.10.280.110; Pre-mRNA processing factor 4 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR014906; PRP4-like.
DR InterPro; IPR036285; PRP4-like_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19846:SF0; SFM DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR19846; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF08799; PRP4; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00500; SFM; 1.
DR SMART; SM00320; WD40; 2.
DR SUPFAM; SSF158230; PRP4-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000053238};
KW Ribonucleoprotein {ECO:0000313|EMBL:KFW93085.1};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT DOMAIN 92..144
FT /note="Pre-mRNA processing factor 4 (PRP4)-like"
FT /evidence="ECO:0000259|SMART:SM00500"
FT REPEAT 271..320
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KFW93085.1"
FT NON_TER 345
FT /evidence="ECO:0000313|EMBL:KFW93085.1"
SQ SEQUENCE 345 AA; 38700 MW; 5BF41C7DCCD58DE1 CRC64;
TKSKPAEESD APPPKRAPIF YGSLEEKERE RLAKGESGLL GKEGMKAALE AGNINISSGE
VFDLEDHMSE RQAEVLAEFE RRKRARQINV STDDSEVKAC LRALGEPITL FGEGPAERRE
RLRNILSVVG TDALKKTRKD DDRSKKSKEE VMVSLVLSLL REVGVILFEV PYFHGQGKYR
DLLLHLSFHR AVKRLEEARL LKEIPEATRT SQRQELHKSL RSLNNFCSQI GDDRPLSYCH
FSPNSKLLAT ACWSGLCKLW SVPDCNLVHT LRGHNTNVGA IVFHPKATVS LDKKDVNLAS
CAADGSVKLW SLESDEPVAD IEGHSMRVAR VMWHPSGRFL GTTWY
//
