ID A0A094F6G9_9PEZI Unreviewed; 517 AA.
AC A0A094F6G9;
DT 26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT 26-NOV-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=Rhamnogalacturonan endolyase {ECO:0008006|Google:ProtNLM};
GN ORFNames=V499_01540 {ECO:0000313|EMBL:KFY79480.1};
OS Pseudogymnoascus sp. VKM F-103.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.
OX NCBI_TaxID=1420912 {ECO:0000313|EMBL:KFY79480.1, ECO:0000313|Proteomes:UP000029295};
RN [1] {ECO:0000313|EMBL:KFY79480.1, ECO:0000313|Proteomes:UP000029295}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM F-103 {ECO:0000313|EMBL:KFY79480.1,
RC ECO:0000313|Proteomes:UP000029295};
RA Leushkin E.V., Logacheva M.D., Penin A.A., Sutormin R.A., Gerasimov E.S.,
RA Kochkina G.A., Ivanushkina N.E., Vasilenko O.V., Kondrashov A.S.,
RA Ozerskaya S.M.;
RT "Population genomics of a fungus Geomyces pannorum provides evidence of
RT horizontal gene transfer but not of sexual reproduction.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFY79480.1}.
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DR EMBL; JPKB01000200; KFY79480.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A094F6G9; -.
DR HOGENOM; CLU_021767_1_0_1; -.
DR Proteomes; UP000029295; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0000272; P:polysaccharide catabolic process; IEA:UniProtKB-KW.
DR CDD; cd10316; RGL4_M; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR029413; RG-lyase_II.
DR InterPro; IPR029411; RG-lyase_III.
DR PANTHER; PTHR32018:SF1; RHAMNOGALACTURONAN ENDOLYASE; 1.
DR PANTHER; PTHR32018; RHAMNOGALACTURONATE LYASE FAMILY PROTEIN; 1.
DR Pfam; PF14683; CBM-like; 1.
DR Pfam; PF14686; fn3_3; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR SUPFAM; SSF49452; Starch-binding domain-like; 1.
PE 4: Predicted;
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277};
KW Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW Polysaccharide degradation {ECO:0000256|ARBA:ARBA00023326};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..517
FT /note="Rhamnogalacturonan endolyase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5001901286"
FT DOMAIN 273..316
FT /note="Rhamnogalacturonan lyase"
FT /evidence="ECO:0000259|Pfam:PF14686"
FT DOMAIN 352..513
FT /note="Rhamnogalacturonan lyase"
FT /evidence="ECO:0000259|Pfam:PF14683"
SQ SEQUENCE 517 AA; 57504 MW; 2B09C171B926C4EB CRC64;
MRASSMPIAL LGAVPVFSID LPTGSDAPFL KIVNDKTCII GNSVWDATLS GSYARPIYYN
GKDIVDDATG FYLSYVNNNG FPWLAPEIVD AGNDWIDVQF TNDIARFHWV IHRGLAGAYQ
YWSNQRDFHS GHTYRKDGKL PTWDLYYSGT EVQDSTVQFS DGTYVSKYDW ATHINIPEAK
LWGVYGDDVG CWFIQPSQEY LNGDQLKQEL TVHMEAQTGD TALLNMIGGG HYQLGVDRTM
ALSRAGSVTG RIITSDSRAG DTLSVFLGDN NDGESTLNQY AGYHYRTTTD SKGYFTFDNV
RTGEYGLFAW PGEGSSLGDI TTNFTHFDIA ITKKDKIDLG TYTWEVQNRT KIWQIGTLDR
LPCEFAGGCG PYGHALTDDA PADLTYTIGS SKAEYWHYVL SNNGAWAINF KLNNEPVVGA
SARLTVSLAA YAARCYMDAA RCYMDIMANG VVIGHIRSMA SDSAIYRSST VAGVWRFLEY
TIKPGTLKKC SNSIKFTTTT TEKWKGAMWD NILLEWE
//
