ID   A0A094K719_ANTCR        Unreviewed;       848 AA.
AC   A0A094K719;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   27-MAR-2024, entry version 38.
DE   RecName: Full=Vacuolar protein sorting-associated protein 41 homolog {ECO:0000256|ARBA:ARBA00029538};
DE   Flags: Fragment;
GN   ORFNames=N321_13896 {ECO:0000313|EMBL:KFZ54173.1};
OS   Antrostomus carolinensis (Chuck-will's-widow) (Caprimulgus carolinensis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Caprimulgiformes;
OC   Caprimulgidae; Antrostomus.
OX   NCBI_TaxID=279965 {ECO:0000313|EMBL:KFZ54173.1, ECO:0000313|Proteomes:UP000053620};
RN   [1] {ECO:0000313|EMBL:KFZ54173.1, ECO:0000313|Proteomes:UP000053620}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BGI_N321 {ECO:0000313|EMBL:KFZ54173.1};
RA   Zhang G., Li C.;
RT   "Genome evolution of avian class.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cytoplasmic vesicle, clathrin-coated vesicle
CC       {ECO:0000256|ARBA:ARBA00004132}. Vesicle
CC       {ECO:0000256|ARBA:ARBA00004373}.
CC   -!- SIMILARITY: Belongs to the VPS41 family.
CC       {ECO:0000256|ARBA:ARBA00009582}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KL343147; KFZ54173.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A094K719; -.
DR   Proteomes; UP000053620; Unassembled WGS sequence.
DR   GO; GO:0030136; C:clathrin-coated vesicle; IEA:UniProtKB-SubCell.
DR   GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0034058; P:endosomal vesicle fusion; IEA:InterPro.
DR   GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
DR   GO; GO:0006623; P:protein targeting to vacuole; IEA:InterPro.
DR   CDD; cd16690; RING-H2_Vps41; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR000547; Clathrin_H-chain/VPS_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR016902; VPS41.
DR   InterPro; IPR045111; Vps41/Vps8.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001841; Znf_RING.
DR   PANTHER; PTHR12616; VACUOLAR PROTEIN SORTING VPS41; 1.
DR   PANTHER; PTHR12616:SF1; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG; 1.
DR   Pfam; PF00637; Clathrin; 1.
DR   PIRSF; PIRSF028921; VPS41; 1.
DR   SMART; SM00299; CLH; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS50236; CHCR; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   3: Inferred from homology;
KW   Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053620};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00175}.
FT   DOMAIN          785..833
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
FT   REGION          1..24
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:KFZ54173.1"
FT   NON_TER         848
FT                   /evidence="ECO:0000313|EMBL:KFZ54173.1"
SQ   SEQUENCE   848 AA;  98471 MW;  5982F74939E81B2C CRC64;
     QETRSNEEST DESEEDESEE EPKLKYERLS NGVTEILQKD AASCMTVHEK FLALGTHYGK
     VYLLDVQGNI TQKFDVSPVK INQISLDESG EHMGVCSEDG KVQVFGLYSA EEFHETFDCP
     IKIVAVHPHF VRSHFKQFVT GGKKLLLYER GWMNRWKPSV LHEGEGNIRN VKWRGHLIAW
     ANNMGVKILD MISKQRITNV PRDDISLRPD MYPCSLCWKD NLTLIIGWGN SVKICSVKER
     HASEMRDLPN RYVEIVFQFD TEFYISGLAP LCDQLVILSY VKEISEKTDV ECCARPRLDI
     VQPLPESCEE ISSDALTVRG FQENECRDYH LEYSEGESLF YIISPRDVVV AKERDQDDHI
     DWLLEKKKYE EALMAAEISQ KTIKKHKILD IGLAYINHLV EKGEYDLAAR KCQKILGKNT
     ELWEFEVYKF KEIGQLKAIS RYLPRRDPVL KPLIYEMVLH EFLESDYEGF ATLIKEWPGD
     LYNNTIIVQA VVDHLKKDPQ NRTLLRTLAE LYTYDQRYGR ALEIYLTLRH KDVFQLIHKH
     NLFSSIRDKI VLLMDFDSEK AVDMLLDNED KISIDRVVEE LENRPELQHV YLHKLFKRDH
     HKGQRYHEKQ ISLYAEYDRP NLLPFLRDST HCPLEKALEI CQQRNFVEET VYLLSRMGNS
     RSALKMIMEE LRDVDKAIEF AKEQDDGELW EDLILYSIDK PPFITGLLNN IGTHVDPILL
     IHRIKEGMEI PNLRDSLVKI LQDYNLQILL REGCKKILVA DSLSLLKKMH RTQMKGVLVD
     EENICESCLS PILPSDASKS FNVVVFHCRH MFHKECLPVS NTVSSVQFCN ICSAKHRGPG
     SAILEMKK
//