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Database: UniProt
Entry: A0A095D337_9SPHN
LinkDB: A0A095D337_9SPHN
Original site: A0A095D337_9SPHN 
ID   A0A095D337_9SPHN        Unreviewed;       201 AA.
AC   A0A095D337;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KGB53603.1};
GN   ORFNames=FG91_02592 {ECO:0000313|EMBL:KGB53603.1};
OS   Sphingopyxis sp. LC81.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingopyxis.
OX   NCBI_TaxID=1502850 {ECO:0000313|EMBL:KGB53603.1, ECO:0000313|Proteomes:UP000029574};
RN   [1] {ECO:0000313|EMBL:KGB53603.1, ECO:0000313|Proteomes:UP000029574}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LC81 {ECO:0000313|EMBL:KGB53603.1,
RC   ECO:0000313|Proteomes:UP000029574};
RA   Gan H.M., Gan H.Y., Barton H.A., Savka M.A.;
RT   "Genome sequence of acyl-homoserine lactone-producing cave bacterial
RT   isolate.";
RL   Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KGB53603.1}.
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DR   EMBL; JNFD01000023; KGB53603.1; -; Genomic_DNA.
DR   RefSeq; WP_037515559.1; NZ_JNFD01000023.1.
DR   AlphaFoldDB; A0A095D337; -.
DR   STRING; 1502850.FG91_02592; -.
DR   PATRIC; fig|1502850.3.peg.2619; -.
DR   eggNOG; COG1595; Bacteria.
DR   OrthoDB; 9803470at2; -.
DR   Proteomes; UP000029574; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR014289; RNA_pol_sigma-24-rel.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02943; Sig70_famx1; 1.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR   PANTHER; PTHR43133:SF28; RNA POLYMERASE SIGMA FACTOR HI_1459-RELATED; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
FT   DOMAIN          19..86
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          136..187
FT                   /note="RNA polymerase sigma factor 70 region 4 type 2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
SQ   SEQUENCE   201 AA;  22538 MW;  73AB7549ED2D03DA CRC64;
     MRRPPQPRPS STPIDPAFVA RVRGDLLRFA RLQLGSDDEA EDAVQEALAA ALRNGDQFRG
     EAALKTWVIA ILKNKIADLL RQRRRRPLGA SQMASEEEGG ALPALFDERG MWREAARPAA
     WEDPEAGLHS DQFLAIFDAC LNRLPAQQGQ VFMMREVVEL ATDEICDELG LTSGNIHVIL
     HRARLALRAC LQHHWFAEEV R
//
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