GenomeNet

Database: UniProt
Entry: A0A096LSC3_POEFO
LinkDB: A0A096LSC3_POEFO
Original site: A0A096LSC3_POEFO 
ID   A0A096LSC3_POEFO        Unreviewed;       264 AA.
AC   A0A096LSC3;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   27-MAR-2024, entry version 38.
DE   RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
OS   Poecilia formosa (Amazon molly) (Limia formosa).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Poecilia.
OX   NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000022064.1, ECO:0000313|Proteomes:UP000028760};
RN   [1] {ECO:0000313|Proteomes:UP000028760}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=female {ECO:0000313|Proteomes:UP000028760};
RA   Schartl M., Warren W.;
RL   Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSPFOP00000022064.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; AYCK01008228; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AYCK01008229; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AYCK01008230; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; A0A096LSC3; -.
DR   Ensembl; ENSPFOT00000027159.1; ENSPFOP00000022064.1; ENSPFOG00000001869.2.
DR   GeneTree; ENSGT00940000157534; -.
DR   Proteomes; UP000028760; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0007399; P:nervous system development; IEA:InterPro.
DR   GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; IEA:InterPro.
DR   GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR   CDD; cd12407; RRM_FOX1_like; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   InterPro; IPR025670; Fox-1_C_dom.
DR   InterPro; IPR034237; FOX1_RRM.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR047131; RBFOX1-like.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR15597; ATAXIN 2-BINDING PROTEIN 1-RELATED; 1.
DR   PANTHER; PTHR15597:SF49; RNA BINDING PROTEIN FOX-1 HOMOLOG; 1.
DR   Pfam; PF12414; Fox-1_C; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   SMART; SM00360; RRM; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
PE   4: Predicted;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028760};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT   DOMAIN          10..86
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
SQ   SEQUENCE   264 AA;  28300 MW;  3A28B6DE19EA380F CRC64;
     DSAEAKGTPK RLHVSNIPFR FRDPDLRQMF GQFGKILDVE IIFNERGSKG FGFVTFENSA
     DAEKAREKLH GTLVEGRKIE VNNATARVMT NKKIVSPYPN AGWKLSPMVG AVYGPEIYAG
     KGVLRLPNDR SAVLTFITLP VPGFPYPTAH LRGRGRPVYS AVRAAVPQPT IPAYPGLVLQ
     DSVLSPRLPQ QGGYPAAAAA AAAYRYAQPA AVTGATAAAA AYSDSYGRVY TTDPYHALTP
     AAAAYGVGAM ASLYRAGYSR FAPY
//
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