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Database: UniProt
Entry: A0A096M413_POEFO
LinkDB: A0A096M413_POEFO
Original site: A0A096M413_POEFO 
ID   A0A096M413_POEFO        Unreviewed;       531 AA.
AC   A0A096M413;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   08-MAY-2019, entry version 28.
DE   SubName: Full=Gamma-aminobutyric acid (GABA) A receptor, alpha 6a {ECO:0000313|Ensembl:ENSPFOP00000026154};
OS   Poecilia formosa (Amazon molly) (Limia formosa).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae;
OC   Poeciliinae; Poecilia.
OX   NCBI_TaxID=48698 {ECO:0000313|Ensembl:ENSPFOP00000026154, ECO:0000313|Proteomes:UP000028760};
RN   [1] {ECO:0000313|Ensembl:ENSPFOP00000026154, ECO:0000313|Proteomes:UP000028760}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=female {ECO:0000313|Ensembl:ENSPFOP00000026154};
RA   Schartl M., Warren W.;
RL   Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSPFOP00000026154}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the ligand-gated ion channel (TC 1.A.9)
CC       family. {ECO:0000256|RuleBase:RU000687,
CC       ECO:0000256|SAAS:SAAS00978283}.
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DR   EMBL; AYCK01003030; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   Ensembl; ENSPFOT00000024368; ENSPFOP00000026154; ENSPFOG00000011013.
DR   GeneTree; ENSGT00940000156722; -.
DR   OMA; NYFATLQ; -.
DR   Proteomes; UP000028760; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005230; F:extracellular ligand-gated ion channel activity; IEA:InterPro.
DR   GO; GO:0004890; F:GABA-A receptor activity; IEA:InterPro.
DR   Gene3D; 2.70.170.10; -; 1.
DR   InterPro; IPR006028; GABAA/Glycine_rcpt.
DR   InterPro; IPR001390; GABAAa_rcpt.
DR   InterPro; IPR006202; Neur_chan_lig-bd.
DR   InterPro; IPR036734; Neur_chan_lig-bd_sf.
DR   InterPro; IPR006201; Neur_channel.
DR   InterPro; IPR036719; Neuro-gated_channel_TM_sf.
DR   InterPro; IPR006029; Neurotrans-gated_channel_TM.
DR   InterPro; IPR018000; Neurotransmitter_ion_chnl_CS.
DR   PANTHER; PTHR18945; PTHR18945; 1.
DR   Pfam; PF02931; Neur_chan_LBD; 1.
DR   Pfam; PF02932; Neur_chan_memb; 1.
DR   PRINTS; PR01079; GABAARALPHA.
DR   PRINTS; PR00253; GABAARECEPTR.
DR   PRINTS; PR00252; NRIONCHANNEL.
DR   SUPFAM; SSF63712; SSF63712; 1.
DR   SUPFAM; SSF90112; SSF90112; 1.
DR   TIGRFAMs; TIGR00860; LIC; 1.
DR   PROSITE; PS00236; NEUROTR_ION_CHANNEL; 1.
PE   3: Inferred from homology;
KW   Cell membrane {ECO:0000256|SAAS:SAAS00457684};
KW   Complete proteome {ECO:0000313|Proteomes:UP000028760};
KW   Disulfide bond {ECO:0000256|SAAS:SAAS00766067};
KW   Ion channel {ECO:0000256|RuleBase:RU000687,
KW   ECO:0000256|SAAS:SAAS00081334};
KW   Ion transport {ECO:0000256|RuleBase:RU000687,
KW   ECO:0000256|SAAS:SAAS00457623};
KW   Membrane {ECO:0000256|SAAS:SAAS00978300, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028760};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAAS:SAAS00978734,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAAS:SAAS00978768,
KW   ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|RuleBase:RU000687,
KW   ECO:0000256|SAAS:SAAS00457659}.
FT   SIGNAL        1     24       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        25    531       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5001926856.
FT   TRANSMEM    243    267       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    274    293       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    308    331       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    497    517       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       36    242       Neur_chan_LBD. {ECO:0000259|Pfam:
FT                                PF02931}.
FT   DOMAIN      250    343       Neur_chan_memb. {ECO:0000259|Pfam:
FT                                PF02932}.
SQ   SEQUENCE   531 AA;  59938 MW;  3F4BC07BB6793A40 CRC64;
     KMAAAPLSAA ALICLISLCS VANAQGGEKV YSDNITRILD RLLDGYDNRL RPGSGGGITE
     VKTDIFVTSF GPVSDVEMEY TMDMFFRQMW VDERLKFEGP IEILRLNNRM VDKIWTPDTF
     FRNSKKSISH NMTTPNKLFR IMQNGTVLYT MRLTISAECP MNLMAFPMDG HACPLRFGSY
     AYTNSEIIFT WRKGLAGSVD CPKESISLLQ YDLVGQILSS EIMRSNTGHY SVQVVHFLLQ
     RKLGYYLIQT YIPLIMVVVL SQVSFWINKE SVPARTVAGV TTVLTMTTLS ISARQSLPKV
     AYATAMDWFI AVCFAFVASA LVEFAAVNYF ATLQANRLKK QRARQDRLEV LAAGSDDDDT
     ISKLAYTNIL LLGKPMLHKS FKTRHRIQIR TQISISVHFQ IMPLPLLTPL RVPRNTNLLF
     CAFMWSYRYP KTQLFTNLIF LPLSSQTDSS HREGLKRRNH SVSCSDAGDI PPVPIFLQQG
     SAFPQIPQLA GTSPIDLYAR ILFPLTFALF NLGYWYIYLT KETIESATCI L
//
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