ID A0A097AUZ9_9VIBR Unreviewed; 489 AA.
AC A0A097AUZ9;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=Ribonuclease G {ECO:0000256|ARBA:ARBA00017719};
GN ORFNames=F0224_22675 {ECO:0000313|EMBL:NOI78462.1}, F0267_18365
GN {ECO:0000313|EMBL:NOH40189.1}, TW71_08810
GN {ECO:0000313|EMBL:KJY74257.1};
OS Vibrio coralliilyticus.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=190893 {ECO:0000313|EMBL:NOH40189.1, ECO:0000313|Proteomes:UP000577246};
RN [1] {ECO:0000313|EMBL:KJY74257.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S2052 {ECO:0000313|EMBL:KJY74257.1};
RX PubMed=25879706; DOI=10.1186/s12864-015-1365-z;
RA Machado H., Sonnenschein E.C., Melchiorsen J., Gram L.;
RT "Genome mining reveals unlocked bioactive potential of marine Gram-negative
RT bacteria.";
RL BMC Genomics 16:158-158(2015).
RN [2] {ECO:0000313|Proteomes:UP000528382, ECO:0000313|Proteomes:UP000577246}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AIC-5 {ECO:0000313|EMBL:NOI78462.1,
RC ECO:0000313|Proteomes:UP000528382}, and X00-12-4
RC {ECO:0000313|EMBL:NOH40189.1, ECO:0000313|Proteomes:UP000577246};
RA Kehlet-Delgado H., Mueller R.S.;
RT "Draft genome sequencing and comparative genomics of hatchery-associated
RT Vibrios.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the RNase E/G family. RNase G subfamily.
CC {ECO:0000256|ARBA:ARBA00005663}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:NOH40189.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JXXR01000009; KJY74257.1; -; Genomic_DNA.
DR EMBL; VTYS01000021; NOH40189.1; -; Genomic_DNA.
DR EMBL; VTXB01000015; NOI78462.1; -; Genomic_DNA.
DR RefSeq; WP_006958278.1; NZ_VTYS01000021.1.
DR STRING; 190893.BA953_10920; -.
DR GeneID; 66920424; -.
DR KEGG; vct:JV59_00760; -.
DR KEGG; vcy:IX92_13430; -.
DR eggNOG; COG1530; Bacteria.
DR OrthoDB; 9804278at2; -.
DR Proteomes; UP000528382; Unassembled WGS sequence.
DR Proteomes; UP000577246; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR048583; RNase_E_G_thioredoxin-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR Pfam; PF20833; RNase_E_G_Thio; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:NOH40189.1};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 39..128
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 489 AA; 55108 MW; FADB4DD9AE892C5A CRC64;
MSAELLINVT PSETRVAMIE GGTLQEIHVE REAKRGIVGN IYKGKVSRVL PGMQAAFVDI
GLDKAAFLHA SDIVPHTECV AENEKQQFQV RDISELVRQG QDIVVQVVKD PLGTKGARLT
TDITLPSRYL VFMPGASHVG VSQRIESEEE RNRLKKVVGH YCDEDGGFII RTAAEGADDT
ELSQDAAFLK RLWSKVNERR SKYKTRSTLY GELGLSQRIL RDFVGTELTK ILVDSRLEFE
NLKEFTSEYV PELTSKLELY EGDKPIFDMY DTENEIQRSL ERKVELKSGG YLIIDQTEAM
TTVDINTGAF VGRRNLEETI FNTNVEATQA IARQLRLRNL GGIIIIDFID MLSEEHRKRV
LTSLEAALDK DRVKTNINGF TQLGLVEMTR KRTRESIEHI LCSTCPTCEG RGSVKTVESV
CYEILREITR VNRAYEADKF VVYASPSVAD ALQGDESHAL AELEVFIGKQ VKVQAEPLYI
QEQFDVVMM
//
