ID A0A097AVG8_9VIBR Unreviewed; 151 AA.
AC A0A097AVG8;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN Name=rimP {ECO:0000256|HAMAP-Rule:MF_01077,
GN ECO:0000313|EMBL:NOH37658.1};
GN ORFNames=F0224_12080 {ECO:0000313|EMBL:NOI76421.1}, F0267_05365
GN {ECO:0000313|EMBL:NOH37658.1}, TW71_19460
GN {ECO:0000313|EMBL:KJY68731.1};
OS Vibrio coralliilyticus.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=190893 {ECO:0000313|EMBL:NOH37658.1, ECO:0000313|Proteomes:UP000577246};
RN [1] {ECO:0000313|EMBL:KJY68731.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S2052 {ECO:0000313|EMBL:KJY68731.1};
RX PubMed=25879706; DOI=10.1186/s12864-015-1365-z;
RA Machado H., Sonnenschein E.C., Melchiorsen J., Gram L.;
RT "Genome mining reveals unlocked bioactive potential of marine Gram-negative
RT bacteria.";
RL BMC Genomics 16:158-158(2015).
RN [2] {ECO:0000313|Proteomes:UP000528382, ECO:0000313|Proteomes:UP000577246}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AIC-5 {ECO:0000313|EMBL:NOI76421.1,
RC ECO:0000313|Proteomes:UP000528382}, and X00-12-4
RC {ECO:0000313|EMBL:NOH37658.1, ECO:0000313|Proteomes:UP000577246};
RA Kehlet-Delgado H., Mueller R.S.;
RT "Draft genome sequencing and comparative genomics of hatchery-associated
RT Vibrios.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SIMILARITY: Belongs to the RimP family. {ECO:0000256|HAMAP-
CC Rule:MF_01077}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:NOH37658.1}.
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DR EMBL; JXXR01000021; KJY68731.1; -; Genomic_DNA.
DR EMBL; VTYS01000004; NOH37658.1; -; Genomic_DNA.
DR EMBL; VTXB01000004; NOI76421.1; -; Genomic_DNA.
DR RefSeq; WP_006958050.1; NZ_VTYS01000004.1.
DR STRING; 190893.BA953_11815; -.
DR GeneID; 66920244; -.
DR KEGG; vct:JV59_01830; -.
DR KEGG; vcy:IX92_12525; -.
DR eggNOG; COG0779; Bacteria.
DR OrthoDB; 9805006at2; -.
DR Proteomes; UP000528382; Unassembled WGS sequence.
DR Proteomes; UP000577246; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR CDD; cd01734; YlxS_C; 1.
DR Gene3D; 2.30.30.180; Ribosome maturation factor RimP, C-terminal domain; 1.
DR Gene3D; 3.30.300.70; RimP-like superfamily, N-terminal; 1.
DR HAMAP; MF_01077; RimP; 1.
DR InterPro; IPR003728; Ribosome_maturation_RimP.
DR InterPro; IPR028998; RimP_C.
DR InterPro; IPR036847; RimP_C_sf.
DR InterPro; IPR028989; RimP_N.
DR InterPro; IPR035956; RimP_N_sf.
DR PANTHER; PTHR33867; RIBOSOME MATURATION FACTOR RIMP; 1.
DR PANTHER; PTHR33867:SF1; RIBOSOME MATURATION FACTOR RIMP; 1.
DR Pfam; PF17384; DUF150_C; 1.
DR Pfam; PF02576; RimP_N; 1.
DR SUPFAM; SSF74942; YhbC-like, C-terminal domain; 1.
DR SUPFAM; SSF75420; YhbC-like, N-terminal domain; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_01077};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_01077}.
FT DOMAIN 12..83
FT /note="Ribosome maturation factor RimP N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02576"
FT DOMAIN 86..151
FT /note="Ribosome maturation factor RimP C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17384"
SQ SEQUENCE 151 AA; 16583 MW; 0913C0C98937F47C CRC64;
MTGLERQLTE MLEAPVAASG YELVGLEFIR AGEHSTLRIF IDHENGISVD DCAEVSRQVS
AVMDVEDPIT VAYNLEVSSP GLERPLFKAA HYEQFIGHEV SIVLKMAVGN RRKWKGVIHA
IEGETVTVTV DGNAEEFALS NISKANLIPK F
//
