ID A0A098VW49_9MICR Unreviewed; 913 AA.
AC A0A098VW49;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=5'-3' exoribonuclease {ECO:0008006|Google:ProtNLM};
GN ORFNames=DI09_10p10 {ECO:0000313|EMBL:KGG53104.1};
OS Mitosporidium daphniae.
OC Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Mitosporidium.
OX NCBI_TaxID=1485682 {ECO:0000313|EMBL:KGG53104.1, ECO:0000313|Proteomes:UP000029725};
RN [1] {ECO:0000313|EMBL:KGG53104.1, ECO:0000313|Proteomes:UP000029725}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UGP3 {ECO:0000313|EMBL:KGG53104.1,
RC ECO:0000313|Proteomes:UP000029725};
RC TISSUE=Spores {ECO:0000313|EMBL:KGG53104.1};
RA Haag K.L., James T.Y., Larsson R., Schaer T.M., Refardt D., Pombert J.-F.,
RA Ebert D.;
RT "A new species of microsporidia sheds light on the evolution of extreme
RT parasitism.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KGG53104.1}.
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DR EMBL; JMKJ01000011; KGG53104.1; -; Genomic_DNA.
DR RefSeq; XP_013239579.1; XM_013384125.1.
DR AlphaFoldDB; A0A098VW49; -.
DR GeneID; 25257963; -.
DR VEuPathDB; MicrosporidiaDB:DI09_10p10; -.
DR HOGENOM; CLU_318582_0_0_1; -.
DR OrthoDB; 167745at2759; -.
DR Proteomes; UP000029725; Unassembled WGS sequence.
DR GO; GO:0004534; F:5'-3' RNA exonuclease activity; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd18673; PIN_XRN1-2-like; 1.
DR Gene3D; 1.25.40.1050; -; 1.
DR Gene3D; 3.40.50.12390; -; 2.
DR InterPro; IPR027073; 5_3_exoribonuclease.
DR InterPro; IPR041412; Xrn1_helical.
DR InterPro; IPR004859; Xrn1_N.
DR PANTHER; PTHR12341; 5'->3' EXORIBONUCLEASE; 1.
DR Pfam; PF17846; XRN_M; 2.
DR Pfam; PF03159; XRN_N; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000029725}.
FT DOMAIN 1..229
FT /note="Xrn1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03159"
FT DOMAIN 287..336
FT /note="Xrn1 helical"
FT /evidence="ECO:0000259|Pfam:PF17846"
FT DOMAIN 401..584
FT /note="Xrn1 helical"
FT /evidence="ECO:0000259|Pfam:PF17846"
FT REGION 818..895
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 836..855
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 913 AA; 101873 MW; 8244A778C465D6A2 CRC64;
MGVPKLFKWL KDRYPLISQS GLGASLKSSG ILPAIDDLFI DANSIIHSCT HPEYGSLPKS
EAEMFYRIGK ELDTMVAIVA PRRMFFVAVD GVAPRAKLNQ QRSRRFRAAA EAATSAGAAA
TTSTANGDAL IAEKFDPNSI TPGTPFMARL SAFLRSFLQS RLKEELYPPK VVYSGQEIPG
EGEHKIMDEI RSLTSQKTLG PICIHGLDAD LIMLSLASHH RQLVLLREQR PFLQRYGSSL
KKERPMPESL GEMTFDVLHI SILRDYLRLE FSCSAETQNL NEEEEKKVAS DFVVLAMLAG
NDFVPHLPGF HIDKGSLSSL LDVYKSVRKP DEYLTSLESS PHISSINWGL LARILTSSGQ
ASPSSSPPIK AVRENSQHEA AETFMDNAVA LKADSSGEED CADGYKNYYS QKLSLTDERA
LEPLFLSYVR ILLWAWIYYY RGLDSWAVFY PYHYAPLGGD IGAWLEKGGP LAHDMLVPAQ
LWGISNGTPL RPLEQLLAVL PIASGATLLP QPLFDLMSSE ALAEWYPLTF AIDVNEKTRS
WEHIVLIPFI DEKKLLSAVR GVENKLTPQE KAFNRQYSQP FIWNKGINHP AARCCDPSLW
PSLFVKNTVF SGSTWGRMSP RRLSPSLQLC LCGAFSLEDG GQYCIQCLLN QIKKGSLFSN
WPYHLHPLSL APMNETHLRV FGLTDGKEIF YDSDGVRRRD LSMAELDLFS LARRVFNMKS
TKIASAFSND IDPGLYFFGR VERGNNDAQG SRNLSVNGVV MRTGKDFFII PPALCVNLKT
PSCAHVNYIW KKEKTSGTNP SNKLPTASSN PYDYFVKSST APNGPNTTPV KMIPEVEENP
HIKQHDRKAR SPEYKLTRKA VNASDLEAKL LGLSMQGPRE TPPPRQPRKD KKDYLCENLK
TALGISSCKR NHK
//