ID A0A099W982_9LIST Unreviewed; 193 AA.
AC A0A099W982;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031};
DE EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};
DE AltName: Full=Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031};
DE Short=IPMI {ECO:0000256|HAMAP-Rule:MF_01031};
DE AltName: Full=Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031};
GN Name=leuD {ECO:0000256|HAMAP-Rule:MF_01031,
GN ECO:0000313|EMBL:KGL40690.1};
GN ORFNames=EP57_09035 {ECO:0000313|EMBL:KGL40690.1}, HB759_02330
GN {ECO:0000313|EMBL:MBC1330778.1}, HB809_02335
GN {ECO:0000313|EMBL:MBC1306535.1}, HB810_03885
GN {ECO:0000313|EMBL:MBC1245726.1}, HB818_03130
GN {ECO:0000313|EMBL:MBC1284754.1}, HB900_03960
GN {ECO:0000313|EMBL:MBC1573600.1}, HB902_01110
GN {ECO:0000313|EMBL:MBC1560650.1}, HBP98_11080
GN {ECO:0000313|EMBL:MBC2372543.1}, HCA46_03425
GN {ECO:0000313|EMBL:MBC1777877.1}, HCA67_01075
GN {ECO:0000313|EMBL:MBC2066343.1}, HCA68_05775
GN {ECO:0000313|EMBL:MBC1897182.1}, HCA73_00535
GN {ECO:0000313|EMBL:MBC1911116.1}, HCA78_09785
GN {ECO:0000313|EMBL:MBC2004059.1}, HCA80_09825
GN {ECO:0000313|EMBL:MBC2036521.1}, HCA81_02900
GN {ECO:0000313|EMBL:MBC2019978.1}, HCB02_09205
GN {ECO:0000313|EMBL:MBC2105129.1}, HCB06_05170
GN {ECO:0000313|EMBL:MBC2116004.1}, HCB08_07120
GN {ECO:0000313|EMBL:MBC2206595.1}, HCB25_01135
GN {ECO:0000313|EMBL:MBC2242647.1}, HCB26_02350
GN {ECO:0000313|EMBL:MBC2165417.1}, HCB29_07365
GN {ECO:0000313|EMBL:MBC2162898.1}, HCB35_01115
GN {ECO:0000313|EMBL:MBC2239058.1}, HCB69_00975
GN {ECO:0000313|EMBL:MBC2282946.1}, HCB83_02315
GN {ECO:0000313|EMBL:MBC2303686.1}, HCC18_01050
GN {ECO:0000313|EMBL:MBC2315416.1}, HCC36_02170
GN {ECO:0000313|EMBL:MBC2292025.1}, HCI99_00550
GN {ECO:0000313|EMBL:MBC1490308.1}, HCJ32_04815
GN {ECO:0000313|EMBL:MBC1944282.1}, HCJ43_12795
GN {ECO:0000313|EMBL:MBC1976152.1}, HCJ81_03175
GN {ECO:0000313|EMBL:MBC2309871.1};
OS Listeria booriae.
OC Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
OX NCBI_TaxID=1552123 {ECO:0000313|EMBL:KGL40690.1, ECO:0000313|Proteomes:UP000029844};
RN [1] {ECO:0000313|EMBL:KGL40690.1, ECO:0000313|Proteomes:UP000029844}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FSL A5-0281 {ECO:0000313|EMBL:KGL40690.1,
RC ECO:0000313|Proteomes:UP000029844};
RA den Bakker H.C.;
RT "Novel Listeriaceae from food processing environments.";
RL Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000519573, ECO:0000313|Proteomes:UP000526161}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FSL L7-0029 {ECO:0000313|EMBL:MBC2315416.1,
RC ECO:0000313|Proteomes:UP000576477}, FSL L7-0035
RC {ECO:0000313|EMBL:MBC2303686.1, ECO:0000313|Proteomes:UP000526161},
RC FSL L7-0039 {ECO:0000313|EMBL:MBC2309871.1,
RC ECO:0000313|Proteomes:UP000565628}, FSL L7-0051
RC {ECO:0000313|EMBL:MBC2292025.1, ECO:0000313|Proteomes:UP000543005},
RC FSL L7-0054 {ECO:0000313|EMBL:MBC2282946.1,
RC ECO:0000313|Proteomes:UP000585696}, FSL L7-0149
RC {ECO:0000313|EMBL:MBC2239058.1, ECO:0000313|Proteomes:UP000553016},
RC FSL L7-0153 {ECO:0000313|EMBL:MBC2242647.1,
RC ECO:0000313|Proteomes:UP000550367}, FSL L7-0217
RC {ECO:0000313|EMBL:MBC2206595.1, ECO:0000313|Proteomes:UP000572892},
RC FSL L7-0245 {ECO:0000313|EMBL:MBC2165417.1,
RC ECO:0000313|Proteomes:UP000519573}, FSL L7-0256
RC {ECO:0000313|EMBL:MBC2162898.1, ECO:0000313|Proteomes:UP000528739},
RC FSL L7-0335 {ECO:0000313|EMBL:MBC2105129.1,
RC ECO:0000313|Proteomes:UP000565263}, FSL L7-0360
RC {ECO:0000313|EMBL:MBC2116004.1, ECO:0000313|Proteomes:UP000529446},
RC FSL L7-0385 {ECO:0000313|EMBL:MBC2019978.1,
RC ECO:0000313|Proteomes:UP000587422}, FSL L7-0435
RC {ECO:0000313|EMBL:MBC2004059.1, ECO:0000313|Proteomes:UP000546806},
RC FSL L7-0459 {ECO:0000313|EMBL:MBC2036521.1,
RC ECO:0000313|Proteomes:UP000591514}, FSL L7-0520
RC {ECO:0000313|EMBL:MBC1976152.1, ECO:0000313|Proteomes:UP000587214},
RC FSL L7-0587 {ECO:0000313|EMBL:MBC2066343.1,
RC ECO:0000313|Proteomes:UP000573524}, FSL L7-0729
RC {ECO:0000313|EMBL:MBC1944282.1, ECO:0000313|Proteomes:UP000552349},
RC FSL L7-0811 {ECO:0000313|EMBL:MBC1911116.1,
RC ECO:0000313|Proteomes:UP000574808}, FSL L7-0818
RC {ECO:0000313|EMBL:MBC1897182.1, ECO:0000313|Proteomes:UP000578190},
RC FSL L7-1017 {ECO:0000313|EMBL:MBC1777877.1,
RC ECO:0000313|Proteomes:UP000547643}, FSL L7-1385
RC {ECO:0000313|EMBL:MBC1573600.1, ECO:0000313|Proteomes:UP000571880},
RC FSL L7-1387 {ECO:0000313|EMBL:MBC1560650.1,
RC ECO:0000313|Proteomes:UP000541955}, FSL L7-1547
RC {ECO:0000313|EMBL:MBC1490308.1, ECO:0000313|Proteomes:UP000533953},
RC FSL L7-1825 {ECO:0000313|EMBL:MBC1306535.1,
RC ECO:0000313|Proteomes:UP000571424}, FSL L7-1827
RC {ECO:0000313|EMBL:MBC1245726.1, ECO:0000313|Proteomes:UP000574869},
RC FSL L7-1833 {ECO:0000313|EMBL:MBC1330778.1,
RC ECO:0000313|Proteomes:UP000532866}, FSL L7-1836
RC {ECO:0000313|EMBL:MBC1284754.1, ECO:0000313|Proteomes:UP000588455},
RC and FSL L7-1850 {ECO:0000313|EMBL:MBC2372543.1,
RC ECO:0000313|Proteomes:UP000546244};
RA Liao J., Wiedmann M.;
RT "Soil Listeria distribution.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes the isomerization between 2-isopropylmalate and 3-
CC isopropylmalate, via the formation of 2-isopropylmaleate.
CC {ECO:0000256|ARBA:ARBA00002695, ECO:0000256|HAMAP-Rule:MF_01031}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate;
CC Xref=Rhea:RHEA:32287, ChEBI:CHEBI:1178, ChEBI:CHEBI:35121;
CC EC=4.2.1.33; Evidence={ECO:0000256|ARBA:ARBA00000491,
CC ECO:0000256|HAMAP-Rule:MF_01031};
CC -!- PATHWAY: Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine
CC from 3-methyl-2-oxobutanoate: step 2/4. {ECO:0000256|ARBA:ARBA00004729,
CC ECO:0000256|HAMAP-Rule:MF_01031}.
CC -!- SUBUNIT: Heterodimer of LeuC and LeuD. {ECO:0000256|ARBA:ARBA00011271,
CC ECO:0000256|HAMAP-Rule:MF_01031}.
CC -!- SIMILARITY: Belongs to the LeuD family. LeuD type 1 subfamily.
CC {ECO:0000256|ARBA:ARBA00009845, ECO:0000256|HAMAP-Rule:MF_01031}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KGL40690.1}.
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DR EMBL; JNFA01000023; KGL40690.1; -; Genomic_DNA.
DR EMBL; JAAROQ010000001; MBC1245726.1; -; Genomic_DNA.
DR EMBL; JAAROI010000001; MBC1284754.1; -; Genomic_DNA.
DR EMBL; JAAROS010000001; MBC1306535.1; -; Genomic_DNA.
DR EMBL; JAAROL010000001; MBC1330778.1; -; Genomic_DNA.
DR EMBL; JAASTX010000001; MBC1490308.1; -; Genomic_DNA.
DR EMBL; JAARRW010000001; MBC1560650.1; -; Genomic_DNA.
DR EMBL; JAARRX010000002; MBC1573600.1; -; Genomic_DNA.
DR EMBL; JAARUV010000001; MBC1777877.1; -; Genomic_DNA.
DR EMBL; JAARWF010000002; MBC1897182.1; -; Genomic_DNA.
DR EMBL; JAARWI010000001; MBC1911116.1; -; Genomic_DNA.
DR EMBL; JAASVH010000002; MBC1944282.1; -; Genomic_DNA.
DR EMBL; JAASWF010000008; MBC1976152.1; -; Genomic_DNA.
DR EMBL; JAARWW010000004; MBC2004059.1; -; Genomic_DNA.
DR EMBL; JAARWY010000001; MBC2019978.1; -; Genomic_DNA.
DR EMBL; JAARWV010000004; MBC2036521.1; -; Genomic_DNA.
DR EMBL; JAARWQ010000001; MBC2066343.1; -; Genomic_DNA.
DR EMBL; JAARXL010000004; MBC2105129.1; -; Genomic_DNA.
DR EMBL; JAARXI010000002; MBC2116004.1; -; Genomic_DNA.
DR EMBL; JAARYE010000002; MBC2162898.1; -; Genomic_DNA.
DR EMBL; JAARYH010000001; MBC2165417.1; -; Genomic_DNA.
DR EMBL; JAARYN010000002; MBC2206595.1; -; Genomic_DNA.
DR EMBL; JAARZA010000001; MBC2239058.1; -; Genomic_DNA.
DR EMBL; JAARYY010000001; MBC2242647.1; -; Genomic_DNA.
DR EMBL; JAARZS010000002; MBC2282946.1; -; Genomic_DNA.
DR EMBL; JAARZT010000003; MBC2292025.1; -; Genomic_DNA.
DR EMBL; JAARZW010000002; MBC2303686.1; -; Genomic_DNA.
DR EMBL; JAASWV010000003; MBC2309871.1; -; Genomic_DNA.
DR EMBL; JAARZZ010000001; MBC2315416.1; -; Genomic_DNA.
DR EMBL; JAARMV010000002; MBC2372543.1; -; Genomic_DNA.
DR RefSeq; WP_036085896.1; NZ_UGPF01000002.1.
DR STRING; 1552123.EP57_09035; -.
DR GeneID; 58717516; -.
DR eggNOG; COG0066; Bacteria.
DR OrthoDB; 9777465at2; -.
DR UniPathway; UPA00048; UER00071.
DR Proteomes; UP000029844; Unassembled WGS sequence.
DR Proteomes; UP000519573; Unassembled WGS sequence.
DR Proteomes; UP000526161; Unassembled WGS sequence.
DR Proteomes; UP000528739; Unassembled WGS sequence.
DR Proteomes; UP000529446; Unassembled WGS sequence.
DR Proteomes; UP000532866; Unassembled WGS sequence.
DR Proteomes; UP000533953; Unassembled WGS sequence.
DR Proteomes; UP000541955; Unassembled WGS sequence.
DR Proteomes; UP000543005; Unassembled WGS sequence.
DR Proteomes; UP000546244; Unassembled WGS sequence.
DR Proteomes; UP000546806; Unassembled WGS sequence.
DR Proteomes; UP000547643; Unassembled WGS sequence.
DR Proteomes; UP000550367; Unassembled WGS sequence.
DR Proteomes; UP000552349; Unassembled WGS sequence.
DR Proteomes; UP000553016; Unassembled WGS sequence.
DR Proteomes; UP000565263; Unassembled WGS sequence.
DR Proteomes; UP000565628; Unassembled WGS sequence.
DR Proteomes; UP000571424; Unassembled WGS sequence.
DR Proteomes; UP000571880; Unassembled WGS sequence.
DR Proteomes; UP000572892; Unassembled WGS sequence.
DR Proteomes; UP000573524; Unassembled WGS sequence.
DR Proteomes; UP000574808; Unassembled WGS sequence.
DR Proteomes; UP000574869; Unassembled WGS sequence.
DR Proteomes; UP000576477; Unassembled WGS sequence.
DR Proteomes; UP000578190; Unassembled WGS sequence.
DR Proteomes; UP000585696; Unassembled WGS sequence.
DR Proteomes; UP000587214; Unassembled WGS sequence.
DR Proteomes; UP000587422; Unassembled WGS sequence.
DR Proteomes; UP000588455; Unassembled WGS sequence.
DR Proteomes; UP000591514; Unassembled WGS sequence.
DR GO; GO:0009316; C:3-isopropylmalate dehydratase complex; IEA:InterPro.
DR GO; GO:0003861; F:3-isopropylmalate dehydratase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.
DR GO; GO:0009098; P:leucine biosynthetic process; IEA:UniProtKB-UniRule.
DR CDD; cd01577; IPMI_Swivel; 1.
DR Gene3D; 3.20.19.10; Aconitase, domain 4; 1.
DR HAMAP; MF_01031; LeuD_type1; 1.
DR InterPro; IPR004431; 3-IsopropMal_deHydase_ssu.
DR InterPro; IPR015928; Aconitase/3IPM_dehydase_swvl.
DR InterPro; IPR000573; AconitaseA/IPMdHydase_ssu_swvl.
DR InterPro; IPR033940; IPMI_Swivel.
DR NCBIfam; TIGR00171; leuD; 1.
DR PANTHER; PTHR43345:SF5; 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT; 1.
DR PANTHER; PTHR43345; 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED; 1.
DR Pfam; PF00694; Aconitase_C; 1.
DR SUPFAM; SSF52016; LeuD/IlvD-like; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis {ECO:0000256|ARBA:ARBA00022605, ECO:0000256|HAMAP-
KW Rule:MF_01031};
KW Branched-chain amino acid biosynthesis {ECO:0000256|ARBA:ARBA00023304,
KW ECO:0000256|HAMAP-Rule:MF_01031}; Isomerase {ECO:0000313|EMBL:KGL40690.1};
KW Leucine biosynthesis {ECO:0000256|ARBA:ARBA00022430, ECO:0000256|HAMAP-
KW Rule:MF_01031};
KW Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000256|HAMAP-Rule:MF_01031};
KW Reference proteome {ECO:0000313|Proteomes:UP000029844}.
FT DOMAIN 2..123
FT /note="Aconitase A/isopropylmalate dehydratase small
FT subunit swivel"
FT /evidence="ECO:0000259|Pfam:PF00694"
SQ SEQUENCE 193 AA; 22059 MW; AB6E4377B12A2A3B CRC64;
MEAMVLHKGR TVALMNDNID TDQIIPKQFL KRIERTGFGE FLFDEWRYLP DRSLNPDFPL
NAPDRQEATI LITGENFGCG SSREHAPWAL LDYRFRIIIA GGYSDIFYMN CTKNGILPIS
LPKEAREKLA TIPASEEIAV DLPKQQVISS VGTYDFEIDA TWKEKFMKGL DDIAQTMEHE
AMITAYENQA RAY
//