ID   A0A0A0A8F2_CHAVO        Unreviewed;      1000 AA.
AC   A0A0A0A8F2;
DT   07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT   07-JAN-2015, sequence version 1.
DT   27-MAR-2024, entry version 28.
DE   SubName: Full=Protocadherin-1 {ECO:0000313|EMBL:KGL89763.1};
DE   Flags: Fragment;
GN   ORFNames=N301_15649 {ECO:0000313|EMBL:KGL89763.1};
OS   Charadrius vociferus (Killdeer) (Aegialitis vocifera).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius.
OX   NCBI_TaxID=50402 {ECO:0000313|EMBL:KGL89763.1, ECO:0000313|Proteomes:UP000053858};
RN   [1] {ECO:0000313|EMBL:KGL89763.1, ECO:0000313|Proteomes:UP000053858}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BGI_N301 {ECO:0000313|EMBL:KGL89763.1};
RA   Zhang G., Li C.;
RT   "Genome evolution of avian class.";
RL   Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; KL870886; KGL89763.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0A0A8F2; -.
DR   STRING; 50402.A0A0A0A8F2; -.
DR   Proteomes; UP000053858; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:InterPro.
DR   GO; GO:0005509; F:calcium ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; IEA:InterPro.
DR   CDD; cd11304; Cadherin_repeat; 7.
DR   Gene3D; 2.60.40.60; Cadherins; 7.
DR   InterPro; IPR002126; Cadherin-like_dom.
DR   InterPro; IPR015919; Cadherin-like_sf.
DR   InterPro; IPR020894; Cadherin_CS.
DR   InterPro; IPR013585; Protocadherin.
DR   PANTHER; PTHR24028; CADHERIN-87A; 1.
DR   PANTHER; PTHR24028:SF247; PROTOCADHERIN-1; 1.
DR   Pfam; PF00028; Cadherin; 6.
DR   Pfam; PF08374; Protocadherin; 1.
DR   PRINTS; PR00205; CADHERIN.
DR   SMART; SM00112; CA; 6.
DR   SUPFAM; SSF49313; Cadherin-like; 7.
DR   PROSITE; PS00232; CADHERIN_1; 4.
DR   PROSITE; PS50268; CADHERIN_2; 7.
PE   4: Predicted;
KW   Calcium {ECO:0000256|ARBA:ARBA00022837, ECO:0000256|PROSITE-
KW   ProRule:PRU00043}; Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053858};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        796..817
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          7..111
FT                   /note="Cadherin"
FT                   /evidence="ECO:0000259|PROSITE:PS50268"
FT   DOMAIN          112..223
FT                   /note="Cadherin"
FT                   /evidence="ECO:0000259|PROSITE:PS50268"
FT   DOMAIN          224..330
FT                   /note="Cadherin"
FT                   /evidence="ECO:0000259|PROSITE:PS50268"
FT   DOMAIN          339..449
FT                   /note="Cadherin"
FT                   /evidence="ECO:0000259|PROSITE:PS50268"
FT   DOMAIN          450..555
FT                   /note="Cadherin"
FT                   /evidence="ECO:0000259|PROSITE:PS50268"
FT   DOMAIN          556..658
FT                   /note="Cadherin"
FT                   /evidence="ECO:0000259|PROSITE:PS50268"
FT   DOMAIN          661..787
FT                   /note="Cadherin"
FT                   /evidence="ECO:0000259|PROSITE:PS50268"
FT   REGION          836..878
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          892..961
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        861..876
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        914..961
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:KGL89763.1"
FT   NON_TER         1000
FT                   /evidence="ECO:0000313|EMBL:KGL89763.1"
SQ   SEQUENCE   1000 AA;  109460 MW;  1220376042653816 CRC64;
     TRVVYKVQEE QPPNTLIGSL ASDYGFPDVG HLYKLEVGAP YLRVDGKTGD IYTTETSIDR
     ESLRDCQHLL PGEPCYLEFE VSITDLILNS SPRLLEGQIE VLDINDNTPN FASPVLTLSI
     PENTNIGTLF PIPLAMDRDS GPNGVASYEL TAGPEAQELF GLQVAEDQDE KQPQLIVMGN
     LDREQWDSYD LTIKVQDGGN PPRASSALLR ITILDMNDNA PKFEKALYEA ELSENSPMGH
     SVLQVKANDS DQGANAEIDY SFHQASDMVR RLLRLDRTTG LITVQGPIDR EDVNILKFSV
     MAKDKGANPK SARTQVVVTI KDMNDNAPSI EIRGIGLVTH QDGMANISED VPVETAVALV
     QVSDRDEGEN AVVTCVVAGD VPFQLRQASE TGSDSKKKYF LQTTTPLDYE SVKEYTIEIV
     AVDSGNPPLS STNSLKVQVV DVNDNAPVFS QSFTEVAFPE NNEPDDLVME VSASDADSGS
     NAKLVYSLVT DPSSKGAFTI DPDSGEIRVK AVLDREQRER YEFLVVAADK GSPSLKGTAS
     VAINVMDRND NDPKFMLSGY NFSVMENMPP LSPVGMVTVI DADKGENARI QLSVEQDNGD
     FVIQNGTGTI LSSISFDREQ QSTYTFRLKA VDGGDPPRSA YVGVTINVLD ENDNAPFITS
     PSNATYKHIL PHTSPGQQVS KVKAEDIDSG VNAELTYSIT GGNPFELFQI SPHSGDITLE
     KEILRKHHGL HRLVVRVNDK GKPSRHGTAL VHFYVNETLA NRTLLDTLVG HSLDTPLDID
     IAGDPEYERS KQRSNILFGV IAGIVAVTLV IVLVVLVRYC RQREAKSGYQ AGKKETKDLY
     APKQASKSGK SKSKVKKSKS PKPPKPTEDE EETGLQKSLK FNLMNDSVSD SPRIHLPLNY
     PPGSPDLGRH YRSNSPLPSI QLQPQSPSAS KKHQVVQDLP ATNTFVGTGD NNSTGSEQYS
     DYSYRTNPQK YTNKQVGELI LRPAAAPALH RGAIWTEVWE
//