ID A0A0A0L1C4_CUCSA Unreviewed; 810 AA.
AC A0A0A0L1C4;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=Csa_4G554180 {ECO:0000313|EMBL:KGN54859.1};
OS Cucumis sativus (Cucumber).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3659 {ECO:0000313|EMBL:KGN54859.1, ECO:0000313|Proteomes:UP000029981};
RN [1] {ECO:0000313|EMBL:KGN54859.1, ECO:0000313|Proteomes:UP000029981}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 9930 {ECO:0000313|Proteomes:UP000029981};
RX PubMed=19881527; DOI=10.1038/ng.475;
RA Huang S., Li R., Zhang Z., Li L., Gu X., Fan W., Lucas W.J., Wang X.,
RA Xie B., Ni P., Ren Y., Zhu H., Li J., Lin K., Jin W., Fei Z., Li G.,
RA Staub J., Kilian A., van der Vossen E.A., Wu Y., Guo J., He J., Jia Z.,
RA Ren Y., Tian G., Lu Y., Ruan J., Qian W., Wang M., Huang Q., Li B.,
RA Xuan Z., Cao J., Asan null, Wu Z., Zhang J., Cai Q., Bai Y., Zhao B.,
RA Han Y., Li Y., Li X., Wang S., Shi Q., Liu S., Cho W.K., Kim J.Y., Xu Y.,
RA Heller-Uszynska K., Miao H., Cheng Z., Zhang S., Wu J., Yang Y., Kang H.,
RA Li M., Liang H., Ren X., Shi Z., Wen M., Jian M., Yang H., Zhang G.,
RA Yang Z., Chen R., Liu S., Li J., Ma L., Liu H., Zhou Y., Zhao J., Fang X.,
RA Li G., Fang L., Li Y., Liu D., Zheng H., Zhang Y., Qin N., Li Z., Yang G.,
RA Yang S., Bolund L., Kristiansen K., Zheng H., Li S., Zhang X., Yang H.,
RA Wang J., Sun R., Zhang B., Jiang S., Wang J., Du Y., Li S.;
RT "The genome of the cucumber, Cucumis sativus L.";
RL Nat. Genet. 41:1275-1281(2009).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM002925; KGN54859.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0A0L1C4; -.
DR EnsemblPlants; KGN54859; KGN54859; Csa_4G554180.
DR Gramene; KGN54859; KGN54859; Csa_4G554180.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; AQVHGCI; -.
DR Proteomes; UP000029981; Chromosome 4.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 9.
DR PANTHER; PTHR24015:SF2015; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029981};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 67..97
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 98..132
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 200..234
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 301..335
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 402..436
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 503..537
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 718..768
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 810 AA; 91063 MW; 20E62AB57A003EF2 CRC64;
MFNIYFQTSN FFTKCNFHFK HPLFIRCIHG IAHYSSNLDS NQLLSELSKN GRVDEARKLF
DQMPYRDKYT WNIMISAYAN LGNLVEARKL FNETPIKNSI TWSSLVSGYC KNGCEVEGLR
QFSQMWSDGQ KPSQYTLGSV LRACSTLSLL HTGKMIHCYA IKIQLEANIF VATGLVDMYS
KCKCLLEAEY LFFSLPDRKN YVQWTAMLTG YAQNGESLKA IQCFKEMRNQ GMESNHFTFP
SILTACTSIS AYAFGRQVHG CIIWSGFGPN VYVQSALVDM YAKCGDLASA RMILDTMEID
DVVCWNSMIV GCVTHGYMEE ALVLFHKMHN RDIRIDDFTY PSVLKSLASC KNLKIGESVH
SLTIKTGFDA CKTVSNALVD MYAKQGNLSC ALDVFNKILD KDVISWTSLV TGYVHNGFHE
KALQLFCDMR TARVDLDQFV VACVFSACAE LTVIEFGRQV HANFIKSSAG SLLSAENSLI
TMYAKCGCLE DAIRVFDSME TRNVISWTAI IVGYAQNGRG KDSLHFYEQM IIDGIKPDGV
TFIGLLFACS HAGLVETGQS YFESMEKVYG IKPASDHYAC MIDLLGRAGK INEAEHLLNR
MDVEPDATIW KSLLSACRVH GNLELGERAG KNLIKLEPSN SLPYVLLSNM FSVAGRWEDA
AHIRRAMKTM GINKEPGYSW IEMKSQVHTF ISEDRSHPLA AEIYSKIDEM MILIKEAGHV
PDMNFALRDM DEEAKERSLA YHSEKLAVAF GLLTVAKGAP IRIFKNLRRG NVLVETSGRL
LKARENFAII NKLLLYRENR VENFVGVVGV
//
