ID A0A0A0LIG6_CUCSA Unreviewed; 544 AA.
AC A0A0A0LIG6;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Nop domain-containing protein {ECO:0000259|PROSITE:PS51358};
GN ORFNames=Csa_2G012710 {ECO:0000313|EMBL:KGN60839.1};
OS Cucumis sativus (Cucumber).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3659 {ECO:0000313|EMBL:KGN60839.1, ECO:0000313|Proteomes:UP000029981};
RN [1] {ECO:0000313|EMBL:KGN60839.1, ECO:0000313|Proteomes:UP000029981}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 9930 {ECO:0000313|Proteomes:UP000029981};
RX PubMed=19881527; DOI=10.1038/ng.475;
RA Huang S., Li R., Zhang Z., Li L., Gu X., Fan W., Lucas W.J., Wang X.,
RA Xie B., Ni P., Ren Y., Zhu H., Li J., Lin K., Jin W., Fei Z., Li G.,
RA Staub J., Kilian A., van der Vossen E.A., Wu Y., Guo J., He J., Jia Z.,
RA Ren Y., Tian G., Lu Y., Ruan J., Qian W., Wang M., Huang Q., Li B.,
RA Xuan Z., Cao J., Asan null, Wu Z., Zhang J., Cai Q., Bai Y., Zhao B.,
RA Han Y., Li Y., Li X., Wang S., Shi Q., Liu S., Cho W.K., Kim J.Y., Xu Y.,
RA Heller-Uszynska K., Miao H., Cheng Z., Zhang S., Wu J., Yang Y., Kang H.,
RA Li M., Liang H., Ren X., Shi Z., Wen M., Jian M., Yang H., Zhang G.,
RA Yang Z., Chen R., Liu S., Li J., Ma L., Liu H., Zhou Y., Zhao J., Fang X.,
RA Li G., Fang L., Li Y., Liu D., Zheng H., Zhang Y., Qin N., Li Z., Yang G.,
RA Yang S., Bolund L., Kristiansen K., Zheng H., Li S., Zhang X., Yang H.,
RA Wang J., Sun R., Zhang B., Jiang S., Wang J., Du Y., Li S.;
RT "The genome of the cucumber, Cucumis sativus L.";
RL Nat. Genet. 41:1275-1281(2009).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the NOP5/NOP56 family.
CC {ECO:0000256|ARBA:ARBA00009211}.
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DR EMBL; CM002923; KGN60839.1; -; Genomic_DNA.
DR RefSeq; XP_004139213.1; XM_004139165.2.
DR AlphaFoldDB; A0A0A0LIG6; -.
DR STRING; 3659.A0A0A0LIG6; -.
DR EnsemblPlants; KGN60839; KGN60839; Csa_2G012710.
DR GeneID; 101217731; -.
DR Gramene; KGN60839; KGN60839; Csa_2G012710.
DR KEGG; csv:101217731; -.
DR eggNOG; KOG2572; Eukaryota.
DR OMA; KGKMARI; -.
DR OrthoDB; 5489581at2759; -.
DR Proteomes; UP000029981; Chromosome 2.
DR GO; GO:0031428; C:box C/D RNP complex; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0030515; F:snoRNA binding; IBA:GO_Central.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.287.4070; -; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR045056; Nop56/Nop58.
DR InterPro; IPR012974; NOP58/56_N.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR PANTHER; PTHR10894; NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58; 1.
DR PANTHER; PTHR10894:SF1; NUCLEOLAR PROTEIN 58; 1.
DR Pfam; PF01798; Nop; 1.
DR Pfam; PF08156; NOP5NT; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000029981}.
FT DOMAIN 280..398
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT REGION 453..544
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 453..534
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 544 AA; 60576 MW; 47CFC459E945A9C9 CRC64;
MLVLFETSAG FALFKVLDEG KLSKVEDLSK DFSNAESARQ IVKLKAFSKF ENMSEALEAT
TLLIDSKPSK GLRKFLRANC DGETLGVADS KLGNIIKEKL QIDCVHNNSV MELIRGLRNQ
LNELIAGLAV QDLAPMSLGL SHSLSRYKLK FSADKVDTMI IQAIGLLDDL DKELNTYAMR
VREWYGWHFP ELAKIIQDNI QYAKTVKLMG NRENAAKLDF SEILPEEVEI ELKEASMISM
GTEVSELDLI NIKELCDQVL SLSEYRAQLY DYLKSRMNTI APNLTALVGE LVGARLIAHG
GSLLNLAKQP GSTVQILGAE KALFRALKTK HATPKYGLIY HASLIGQAAP KLKGKISRSL
AAKTALAIRC DALGDGQDNT MGLENRAKLE ARLRSLEGKE LGHVAGSAKG KPRIEAYDKD
RKKSIGGLIT AAKTYNPAAD SLLGKLEKAI EEEAEAPVTG QEKKEKKKKK KRVEEEEDSK
PEVENVGKDE KKKKKKRTEE VEEVQNGSEE KEKKKKKKRK HDEDEEEAEQ PSKKKEKKKK
KSQE
//
