ID A0A0A0LP87_CUCSA Unreviewed; 445 AA.
AC A0A0A0LP87;
DT 07-JAN-2015, integrated into UniProtKB/TrEMBL.
DT 07-JAN-2015, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=Csa_1G012110 {ECO:0000313|EMBL:KGN63710.1};
OS Cucumis sativus (Cucumber).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3659 {ECO:0000313|EMBL:KGN63710.1, ECO:0000313|Proteomes:UP000029981};
RN [1] {ECO:0000313|EMBL:KGN63710.1, ECO:0000313|Proteomes:UP000029981}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 9930 {ECO:0000313|Proteomes:UP000029981};
RX PubMed=19881527; DOI=10.1038/ng.475;
RA Huang S., Li R., Zhang Z., Li L., Gu X., Fan W., Lucas W.J., Wang X.,
RA Xie B., Ni P., Ren Y., Zhu H., Li J., Lin K., Jin W., Fei Z., Li G.,
RA Staub J., Kilian A., van der Vossen E.A., Wu Y., Guo J., He J., Jia Z.,
RA Ren Y., Tian G., Lu Y., Ruan J., Qian W., Wang M., Huang Q., Li B.,
RA Xuan Z., Cao J., Asan null, Wu Z., Zhang J., Cai Q., Bai Y., Zhao B.,
RA Han Y., Li Y., Li X., Wang S., Shi Q., Liu S., Cho W.K., Kim J.Y., Xu Y.,
RA Heller-Uszynska K., Miao H., Cheng Z., Zhang S., Wu J., Yang Y., Kang H.,
RA Li M., Liang H., Ren X., Shi Z., Wen M., Jian M., Yang H., Zhang G.,
RA Yang Z., Chen R., Liu S., Li J., Ma L., Liu H., Zhou Y., Zhao J., Fang X.,
RA Li G., Fang L., Li Y., Liu D., Zheng H., Zhang Y., Qin N., Li Z., Yang G.,
RA Yang S., Bolund L., Kristiansen K., Zheng H., Li S., Zhang X., Yang H.,
RA Wang J., Sun R., Zhang B., Jiang S., Wang J., Du Y., Li S.;
RT "The genome of the cucumber, Cucumis sativus L.";
RL Nat. Genet. 41:1275-1281(2009).
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DR EMBL; CM002922; KGN63710.1; -; Genomic_DNA.
DR RefSeq; XP_004138185.2; XM_004138137.2.
DR AlphaFoldDB; A0A0A0LP87; -.
DR EnsemblPlants; KGN63710; KGN63710; Csa_1G012110.
DR GeneID; 101205563; -.
DR Gramene; KGN63710; KGN63710; Csa_1G012110.
DR KEGG; csv:101205563; -.
DR eggNOG; ENOG502R8AY; Eukaryota.
DR OMA; CNSHEVF; -.
DR OrthoDB; 1215821at2759; -.
DR Proteomes; UP000029981; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003725; F:double-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0003727; F:single-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 4.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45762; ZINC FINGER RNA-BINDING PROTEIN; 1.
DR PANTHER; PTHR45762:SF19; ZINC-FINGER PROTEIN AT 72D, ISOFORM B; 1.
DR Pfam; PF12874; zf-met; 4.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SMART; SM00451; ZnF_U1; 4.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029981}.
FT DOMAIN 142..176
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT DOMAIN 145..169
FT /note="C2H2-type"
FT /evidence="ECO:0000259|SMART:SM00355"
FT DOMAIN 232..266
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT DOMAIN 235..259
FT /note="C2H2-type"
FT /evidence="ECO:0000259|SMART:SM00355"
FT DOMAIN 293..327
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT DOMAIN 296..320
FT /note="C2H2-type"
FT /evidence="ECO:0000259|SMART:SM00355"
FT DOMAIN 393..427
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT DOMAIN 396..420
FT /note="C2H2-type"
FT /evidence="ECO:0000259|SMART:SM00355"
FT REGION 345..385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 354..375
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 445 AA; 48113 MW; FF982DDBF4C7DC0A CRC64;
MFYHHQQQPP PPSSVPLYFP PHPHIVNANP SSFHPFPQPV LPPAVPSEPG LHPPGTDPYS
NSTVLTSTYV GLEPQPQFYA DPSLASHTWV LPQLDAAGFA FKSLLENQIA STSSNSLLNG
NWPTQSLAYN ATRTKHVKTK FTQPVRCEVC KIDCNSKDVF DKHVMGRKHK KNLEVPNSSL
TSSTPSDGNT IVLNQMGNVS GQVAQVTADV PAARKGLKSK KRKLIDTSMK ADCTRVCTVC
NIVCTSQEVF DKHTSGKKHA AQAALTSQVP YVTAIGPQYD GNLKKKLKKN KVVQSAWCEV
CKISCNSNEI YAVHLSGKKH LKNVEKVKKG TSDVSTSSTP QLATVPVIGP MENPAANNPS
SDGIQKTQTS STQTPEELET KKRKIVKSGS AANSVRTCTI CNVVCNSQTV FDSHLAGQKH
ATMMKKQGVS GMSMVVPPLI TALPN
//
