ID A0A0A1YQ03_9PSED Unreviewed; 775 AA.
AC A0A0A1YQ03;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Transcription accessory protein {ECO:0000313|EMBL:KFX71221.1};
GN ORFNames=TMS3_0104620 {ECO:0000313|EMBL:KFX71221.1};
OS Pseudomonas taeanensis MS-3.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1395571 {ECO:0000313|EMBL:KFX71221.1, ECO:0000313|Proteomes:UP000030063};
RN [1] {ECO:0000313|EMBL:KFX71221.1, ECO:0000313|Proteomes:UP000030063}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MS-3 {ECO:0000313|EMBL:KFX71221.1,
RC ECO:0000313|Proteomes:UP000030063};
RX PubMed=24407626;
RA Lee S.Y., Kim S.H., Lee D.G., Shin S., Yun S.H., Choi C.W., Chung Y.H.,
RA Choi J.S., Kahng H.Y., Kim S.I.;
RT "Draft Genome Sequence of Petroleum Oil-Degrading Marine Bacterium
RT Pseudomonas taeanensis Strain MS-3, Isolated from a Crude Oil-Contaminated
RT Seashore.";
RL Genome Announc. 2:0-0(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KFX71221.1}.
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DR EMBL; AWSQ01000001; KFX71221.1; -; Genomic_DNA.
DR RefSeq; WP_025164058.1; NZ_AWSQ01000001.1.
DR AlphaFoldDB; A0A0A1YQ03; -.
DR STRING; 1395571.TMS3_0104620; -.
DR eggNOG; COG2183; Bacteria.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000030063; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000030063}.
FT DOMAIN 649..718
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 717..775
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 775 AA; 84431 MW; C3623D986C8A965C CRC64;
MLSINNRIAE ELGVRPQQVA AAVALLDEGS TVPFIARYRK EVTGSLDDTQ LRNLEERLRY
LRELDDRRAS ILASIEEQGK LTPELSREIN LAETKTRLED LYLPYKQKRR TKGQIALEAG
LGELADALFG DPSLTPETEA ARFVDSEKGY ADIKAVLEGA KYILMERFAE DANLLANLRS
FLKDHATLSA RVIAGKEDEG AKFRDYFEHD EKLKSAPSHR ALAIFRGRNE GFLSASLKVG
EELPGTLHPC EGMVGERFGI KDQGRAADKW LGEVVRWTWK VKLYTHLETD LLGELREAAE
DEAISVFARN MHDLLLAAPA GPRATLGLDP GLRTGCKVAV VDATGKLLDT ATVYPHVPKN
QWDQTLAVLA ALCAKHSVDL IAIGNGTASR ETDKLAAELI KKHPGLNMTK IMVSEAGASV
YSASELAAKE FPELDVSLRG AVSIARRLQD PLAELVKIDP KAIGVGQYQH DVSQLKLARS
LDAVVEDCVN AVGVDVNTAS AALLARISGL NATLAHNIVA HRDANGAFKT RNELKKVSRL
GEKTFEQAAG FLRVMNGDNP LDASAVHPET YPLVQRIALD TGRDIRSLVG DASFLKRLDP
KQFTDETFGL LTVGDILQEL EKPGRDPRPE FKTAEFQDGV ETLKDLKLGM ILEGVVTNVT
NFGAFVDIGV HQDGLVHISA LSEKFIKDPH EAVKAGDVVK VKVMEVDIAR NRIALSMRMG
DTPGEKVEGQ RGGARGSGNP RGSAPRSERH SSQDKPAPAS AGMASLFANA KQLRK
//
