ID A0A0A2X1R7_9GAMM Unreviewed; 187 AA.
AC A0A0A2X1R7;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Sigma factor, ECF-like family protein {ECO:0000313|EMBL:KGQ19129.1};
GN ORFNames=LF41_3161 {ECO:0000313|EMBL:KGQ19129.1};
OS Lysobacter dokdonensis DS-58.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Lysobacter.
OX NCBI_TaxID=1300345 {ECO:0000313|EMBL:KGQ19129.1, ECO:0000313|Proteomes:UP000030518};
RN [1] {ECO:0000313|EMBL:KGQ19129.1, ECO:0000313|Proteomes:UP000030518}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DS-58 {ECO:0000313|EMBL:KGQ19129.1,
RC ECO:0000313|Proteomes:UP000030518};
RA Kim J.F., Kwak M.-J.;
RT "Genome sequences of Lysobacter dokdonensis DS-58.";
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KGQ19129.1}.
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DR EMBL; JRKJ01000009; KGQ19129.1; -; Genomic_DNA.
DR RefSeq; WP_036168671.1; NZ_JRKJ01000009.1.
DR AlphaFoldDB; A0A0A2X1R7; -.
DR STRING; 1300345.LF41_3161; -.
DR PATRIC; fig|1300345.3.peg.1698; -.
DR eggNOG; COG1595; Bacteria.
DR OrthoDB; 128473at2; -.
DR Proteomes; UP000030518; Unassembled WGS sequence.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR011517; RNA_pol_sigma70_ECF-like.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02999; Sig-70_X6; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF39; SIMILAR TO RNA POLYMERASE SIGMA-E FACTOR; 1.
DR Pfam; PF07638; Sigma70_ECF; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000030518};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023082};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023082}.
SQ SEQUENCE 187 AA; 20871 MW; 1F92E5422A354E5E CRC64;
MSETADITEL LDAARDGDRG ALDRVLATLY QELHAMARRQ LAGQHGHTLD ATALVHEAYL
KLVGRNSAQF DDRAHFFAYA ASAMRSVVVD YARQRLAQKR GGDLHRVTEL PEEVEGGLRL
DEETLGLDTA LTRLAAVDAR LAQVVELRYF AGLSELEIAA LLKRSERSIR RDWQKARLFL
LASLKDS
//
