ID A0A0A6NZL0_9GAMM Unreviewed; 455 AA.
AC A0A0A6NZL0;
DT 04-FEB-2015, integrated into UniProtKB/TrEMBL.
DT 04-FEB-2015, sequence version 1.
DT 03-MAY-2023, entry version 36.
DE SubName: Full=Type IV fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:OAD19923.1};
GN ORFNames=THIOM_004405 {ECO:0000313|EMBL:OAD19923.1};
OS Candidatus Thiomargarita nelsonii.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC Thiotrichaceae; Thiomargarita.
OX NCBI_TaxID=1003181 {ECO:0000313|EMBL:OAD19923.1, ECO:0000313|Proteomes:UP000076962};
RN [1] {ECO:0000313|EMBL:OAD19923.1, ECO:0000313|Proteomes:UP000076962}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=THI036 {ECO:0000313|EMBL:OAD19923.1,
RC ECO:0000313|Proteomes:UP000076962};
RA Winkel M., Salman V., Woyke T., Schulz-Vogt H., Richter M., Flood B.,
RA Bailey J., Amann R., Mussmann M.;
RT "Single-cell genome of chain-forming Candidatus Thiomargarita nelsonii and
RT comparison to other large sulfur-oxidizing bacteria.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAD19923.1}.
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DR EMBL; LUTY01002610; OAD19923.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0A6NZL0; -.
DR PATRIC; fig|1003181.4.peg.5809; -.
DR Proteomes; UP000076962; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF100; RESPONSE REGULATOR PROTEIN PILR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00072; Response_reg; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00448; REC; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Phosphoprotein {ECO:0000256|PROSITE-ProRule:PRU00169};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 5..116
FT /note="Response regulatory"
FT /evidence="ECO:0000259|PROSITE:PS50110"
FT DOMAIN 143..376
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT MOD_RES 54
FT /note="4-aspartylphosphate"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00169"
SQ SEQUENCE 455 AA; 50733 MW; 3310234D68CB0315 CRC64;
MSKPLCLVVD DEPDILELLV MTLKPMGITC YTAETLAQAQ EYLLAYEFDL CLTDMRLPDG
NGIELVTTFG NQTPIVVITA HGNVESAVAA MKAGAFDFIA KPVKLLELRN LVTTALQLPK
PDKQTKPAET QKKQPENILL SKLIGRSEAM QTVRAKIEKL ARSQAHVYIK GESGTGKEVV
AHLIHALGAR AKQAFTPVNC GAIPTELMES EFFGHKKGAH STAHNDKQGL FQAADGGTLF
LDEIADLPLH MQVKLLRAIQ EKQVRPVGAA KEIPVDIRIL SATHRNLAEL VKQGQFRQDL
FYRVNVIELY IPPLRERIED IPDLVAKILA KLKSNDTTSE YHQQTTISDK AIKSLQAYSF
PGNVRELENL LERAVTLCEN NIIKPQDLQL PDEKATLPNH QEQAGFRSHM EEVERKTIMN
ALAQTHGNKA KAAKLLSISY STLRYRIQKH KIEYK
//
