ID A0A0A7EKL4_9GAMM Unreviewed; 720 AA.
AC A0A0A7EKL4;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIY66512.1};
GN ORFNames=OM33_15285 {ECO:0000313|EMBL:AIY66512.1};
OS Pseudoalteromonas piratica.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Pseudoalteromonadaceae; Pseudoalteromonas.
OX NCBI_TaxID=1348114 {ECO:0000313|EMBL:AIY66512.1, ECO:0000313|Proteomes:UP000030341};
RN [1] {ECO:0000313|EMBL:AIY66512.1, ECO:0000313|Proteomes:UP000030341}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OCN003 {ECO:0000313|EMBL:AIY66512.1,
RC ECO:0000313|Proteomes:UP000030341};
RA Beurmann S., Videau P., Ushijima B., Smith A.M., Aeby G.S., Callahan S.M.,
RA Belcaid M.;
RT "Complete Genome Sequence of Pseudoalteromonas sp. Strain OCN003 Isolated
RT from Kaneohe Bay, Oahu, Hawaii.";
RL Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR EMBL; CP009889; AIY66512.1; -; Genomic_DNA.
DR RefSeq; WP_040134786.1; NZ_CP009889.1.
DR AlphaFoldDB; A0A0A7EKL4; -.
DR STRING; 1348114.OM33_15285; -.
DR KEGG; pseo:OM33_15285; -.
DR eggNOG; COG2176; Bacteria.
DR HOGENOM; CLU_388147_0_0_6; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000030341; Chromosome 2.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR Gene3D; 3.40.1350.10; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR049125; FAN1-like_WH.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR011856; tRNA_endonuc-like_dom_sf.
DR InterPro; IPR014883; VRR_NUC.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF21315; FAN1_HTH; 1.
DR Pfam; PF00929; RNase_T; 1.
DR Pfam; PF08774; VRR_NUC; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00990; VRR_NUC; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000030341}.
FT DOMAIN 446..545
FT /note="VRR-NUC"
FT /evidence="ECO:0000259|SMART:SM00990"
FT DOMAIN 552..717
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
SQ SEQUENCE 720 AA; 82913 MW; BD0C71F6AE814F69 CRC64;
MKELPEKYYL SHFVEFVTFI KTTSAHLLAT AELDFISHFE TLNEDAQCML VRIVNRKSPF
IRKDTLTYNE INDSATAINI LRKAGFVARI SKHTLSDFFS QLNKQDLIDL CASLALDKPV
KSATKSKWLN FVLNNQNSGL SYENVKKHPV LTSHIYFAKQ STFSYLLFLY FGHLSGRLNQ
FSLRDLGVMQ TQGVQQQQAN FSDIDEAKSA FLHATLFNDI KQADKTDIPS LTTLALKLLE
TELPIGYLAS QKYHHGLYKL AIALIADNTE LGERLLSESQ HPAAKEKYIR LLYKSGRIAL
CETLLLDILD DPESETLLLF AEDFYALKFN QKRTSLLTDV LRDSPTPIAL DEAYLGHVEN
GVKDRYIKQK KQCYFTENKL WRALFALTFW HELYQHPESK RANEFSYFPK VLKENSFFHS
LESEIKQKLA QLNNKERFIN YIATTILEHS GEPNGLFYWH PELSEVLTHF LHHAPINAVH
NHLLNMAQLF KELSDGYPDL MIINNGELYF EEIKAPGDSL RRNQLISIKH LINAGFKVKI
QRTEWRFNTE QSYVVVDIET TGGKKEHHRI TEIGMVRIEQ GVITDTWQTL VNPERHIPKM
ITELTGISNE MVKDAPLFEH IAEKLNTFSQ NAIFVAHNVN FDYGFIRQEF ARLNQKYTRA
KICTVQQARK YLPGHQSYSL GKLCADLNIE LKNHHRALDD ATAAAKILLH INDVRIKLGE
//
