ID A0A0A7PGV7_9SPHN Unreviewed; 570 AA.
AC A0A0A7PGV7;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN Name=rpsA {ECO:0000313|EMBL:AJA09179.1};
GN ORFNames=SKP52_11405 {ECO:0000313|EMBL:AJA09179.1};
OS Sphingopyxis fribergensis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=1515612 {ECO:0000313|EMBL:AJA09179.1, ECO:0000313|Proteomes:UP000030907};
RN [1] {ECO:0000313|EMBL:AJA09179.1, ECO:0000313|Proteomes:UP000030907}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Kp5.2 {ECO:0000313|EMBL:AJA09179.1,
RC ECO:0000313|Proteomes:UP000030907};
RX PubMed=26040579; DOI=10.1099/ijs.0.000371;
RA Oelschlagel M., Ruckert C., Kalinowski J., Schmidt G., Schlomann M.,
RA Tischler D.;
RT "Description of Sphingopyxis fribergensis sp. nov. - a soil bacterium with
RT the ability to degrade styrene and phenylacetic acid.";
RL Int. J. Syst. Evol. Microbiol. 65:3008-3015(2015).
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
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DR EMBL; CP009122; AJA09179.1; -; Genomic_DNA.
DR RefSeq; WP_039574807.1; NZ_CP009122.1.
DR AlphaFoldDB; A0A0A7PGV7; -.
DR STRING; 1515612.SKP52_11405; -.
DR KEGG; sphk:SKP52_11405; -.
DR HOGENOM; CLU_015805_2_1_5; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000030907; Chromosome.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 5.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:AJA09179.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 29..95
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 113..179
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 200..268
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 285..355
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 372..442
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 464..533
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 570 AA; 61597 MW; C3272A0D11EC0FCF CRC64;
MATTAFPTRD DFAAMLDESL GGADGGFEGR VVKGTVTAIE NDLAVIDIGL KSEGRVPLRE
FAMPGQKADI NVGDEVEVYV DRVENANGET MLSRDRARRE AAWDRLEEEF NKEARVEGVI
FGRVKGGFTV DLGGAVAFLP GSQVDIRPVR DVGPLMDLPQ PFQILKMDRR RGNIVVSRRA
ILEETRAEQR SGLILNLEEG QIIEGAVKNI TDYGAFVDLG GIDGLLHVTD MSYKRVNHPS
EVINIGDTVR VQIIRINRDT QRISLGMKQL ESDPWEGVAA KYPVGAKLSG TVTNITDYGA
FVELEAGIEG LVHVSEMSWV KKNVHPGKIV STSQEVDVIV LEVDSDKRRI SLGLKQAQSN
PWGAFAETHP VGSVVEGEVK NATEFGLFVG LPGDVDGMVH MSDIAWGISG EEALHLHRKG
EAVQVVVLDV DVEKERISLG IKQLEKGAPA VGGGTAAAGS VKKNDVVTVT VLEVRDNGLE
VQAGDDGATG FIKRADLGRD RDEQRAERYQ VGQKFDAMVI GFDRSKKPNF SVKAMQIAEE
KQAVAQYGSS DSGASLGDIL GEALKAGKKD
//
