GenomeNet

Database: UniProt
Entry: A0A0A7V297_9ARCH
LinkDB: A0A0A7V297_9ARCH
Original site: A0A0A7V297_9ARCH 
ID   A0A0A7V297_9ARCH        Unreviewed;       139 AA.
AC   A0A0A7V297;
DT   04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT   04-MAR-2015, sequence version 1.
DT   20-JUN-2018, entry version 18.
DE   SubName: Full=Putative HTH-type transcriptional regulator LysM {ECO:0000313|EMBL:AJA92316.1};
DE   SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:PTL88498.1};
GN   ORFNames=A7X95_03075 {ECO:0000313|EMBL:PTL88498.1}, T478_1047
GN   {ECO:0000313|EMBL:AJA92316.1};
OS   Candidatus Nitrosopelagicus brevis.
OC   Archaea; Thaumarchaeota; unclassified Thaumarchaeota.
OX   NCBI_TaxID=1410606 {ECO:0000313|EMBL:AJA92316.1, ECO:0000313|Proteomes:UP000030944};
RN   [1] {ECO:0000313|EMBL:AJA92316.1, ECO:0000313|Proteomes:UP000030944}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CN25 {ECO:0000313|EMBL:AJA92316.1}, and V2
RC   {ECO:0000313|Proteomes:UP000030944};
RX   PubMed=25587132; DOI=10.1073/pnas.1416223112;
RA   Santoro A.E., Dupont C.L., Richter R.A., Craig M.T., Carini P.,
RA   McIlvin M.R., Yang Y., Orsi W.D., Moran D.M., Saito M.A.;
RT   "Genomic and proteomic characterization of "Candidatus
RT   Nitrosopelagicus brevis": an ammonia-oxidizing archaeon from the open
RT   ocean.";
RL   Proc. Natl. Acad. Sci. U.S.A. 112:1173-1178(2015).
RN   [2] {ECO:0000313|EMBL:PTL88498.1, ECO:0000313|Proteomes:UP000241022}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=U25 {ECO:0000313|EMBL:PTL88498.1,
RC   ECO:0000313|Proteomes:UP000241022};
RA   Lavstsen T., Jespersen J.S.;
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:PTL88498.1, ECO:0000313|Proteomes:UP000241022}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=U25 {ECO:0000313|EMBL:PTL88498.1,
RC   ECO:0000313|Proteomes:UP000241022};
RA   Carini P.;
RT   "Transcriptomics of ammonia oxidizing archaea.";
RL   Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP007026; AJA92316.1; -; Genomic_DNA.
DR   EMBL; LXWN01000001; PTL88498.1; -; Genomic_DNA.
DR   RefSeq; WP_048106967.1; NZ_CP007026.1.
DR   EnsemblBacteria; AJA92316; AJA92316; T478_1047.
DR   GeneID; 24816930; -.
DR   KEGG; nbv:T478_1047; -.
DR   Proteomes; UP000030944; Chromosome.
DR   Proteomes; UP000241022; Unassembled WGS sequence.
DR   GO; GO:0005622; C:intracellular; IEA:InterPro.
DR   GO; GO:0003700; F:DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd00090; HTH_ARSR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011991; ArsR-like_HTH.
DR   InterPro; IPR000485; AsnC-type_HTH_dom.
DR   InterPro; IPR011008; Dimeric_a/b-barrel.
DR   InterPro; IPR019888; Tscrpt_reg_AsnC-typ.
DR   InterPro; IPR019887; Tscrpt_reg_AsnC/Lrp_C.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF01037; AsnC_trans_reg; 1.
DR   Pfam; PF13404; HTH_AsnC-type; 1.
DR   PRINTS; PR00033; HTHASNC.
DR   SMART; SM00344; HTH_ASNC; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF54909; SSF54909; 1.
DR   PROSITE; PS50956; HTH_ASNC_2; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000030944,
KW   ECO:0000313|Proteomes:UP000241022};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00319};
KW   Reference proteome {ECO:0000313|Proteomes:UP000030944};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00319};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00319}.
FT   DOMAIN        1     66       HTH asnC-type. {ECO:0000259|PROSITE:
FT                                PS50956}.
FT   DNA_BIND     22     41       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00319}.
SQ   SEQUENCE   139 AA;  15657 MW;  7E5A9ACF59E5BBEE CRC64;
     MLKDKIDEKI LEYLRNDSRE SFVEIGKKLK LSESAVRRRV KNLVDSKVIE RFTIEMGEMN
     STSAIVLISV DSTTDTSKVS SRLTKLNAVK TVYEITGQYD ISVIIKAPSI TEINAAIDEL
     RKIPGVIDTN TVIILRTIR
//
DBGET integrated database retrieval system