ID A0A0B0MW42_GOSAR Unreviewed; 807 AA.
AC A0A0B0MW42;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=F383_31148 {ECO:0000313|EMBL:KHG04985.1};
OS Gossypium arboreum (Tree cotton) (Gossypium nanking).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29729 {ECO:0000313|EMBL:KHG04985.1, ECO:0000313|Proteomes:UP000032142};
RN [1] {ECO:0000313|Proteomes:UP000032142}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. AKA8401 {ECO:0000313|Proteomes:UP000032142};
RA Mudge J., Ramaraj T., Lindquist I.E., Bharti A.K., Sundararajan A.,
RA Cameron C.T., Woodward J.E., May G.D., Brubaker C., Broadhvest J.,
RA Wilkins T.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KHG04985.1}.
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DR EMBL; JRRC01421485; KHG04985.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0B0MW42; -.
DR Proteomes; UP000032142; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd17973; DEXHc_DHX15; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR044756; DHX15_DEXHc.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF109; ATP-DEPENDENT RNA HELICASE DHX15 HOMOLOG; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000032142}.
FT DOMAIN 71..240
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 265..445
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 807 AA; 91463 MW; F8C27E6F0BFBF29F CRC64;
MGTERKRKVS LFDVTDEPSA KIAKSNGLGF TETNANSSIN KWNGRPYSQR YYDILEKRKT
LPVWQQKEEF LQVLRANQTL ILVGETGSGK TTQIPQFVLD AVDIETPDKR RKMMIACTQP
RRVAAMSVSR RVAEEMDVTI GEEVGYSIRF EDCSSARTVL KYLTDGMLLR EAMTDPLLER
YKVIILDEAH ERTLATDVLF GLLKEVLKNR PDLKLVVMSA TLEAEKFQGY FNGAPLMKVP
GRLHPVEIFY TQEPERDYLE AAIRTVVQIH MCEPPGDILV FLTGEEEIED ACRKITKEVG
NMGDQVGPVK VVPLYSTLPP AMQQKIFEPA PPPVKEGGPP GRKIVVSTNI AETSLTIDGI
VYVIDPGFSK QKVYNPRVRV ESLLVSPISK ASAHQRSGRA GRTQPGKCFR LYTEKSFNND
LQPQTYPEIL RSNLANTVLT LKKLGIDDLV HFDFMDPPAP ETLMRALEVL NYLGALDDEG
NLTKLGEIMS EFPLDPQMSK MLVVSSEFNC SNEILSVAAM LSGTSICFLA CFVFLLSQVL
GSCPGAISCL ISSLSERVFA LRLVHNTRLS SATVLSGFHA PVGMHHRISK QVLMQIVSVS
QYSLMKQMVS PCLEAQKAAD EAKARFGHID GDHLTLLNVY HAYKQNNEDQ SWCYENFINH
RALKAADNVR QQLVRIMSRF NLKLCSTDFN SRDYYVNIRK AMLAGYFMQV AHLERTGHYL
TVKDNQVVHL HPSNCLDHKP EWVIYNEYVL TSRNFIRTVT DIRGEWLVDI APHYYDLENF
PQCEAKRVLE KLYRKKEKDR EESRNRR
//