ID A0A0B0PNX6_GOSAR Unreviewed; 960 AA.
AC A0A0B0PNX6;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Pre-mRNA-processing factor 40 A {ECO:0000313|EMBL:KHG26690.1};
GN ORFNames=F383_10570 {ECO:0000313|EMBL:KHG26690.1};
OS Gossypium arboreum (Tree cotton) (Gossypium nanking).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29729 {ECO:0000313|EMBL:KHG26690.1, ECO:0000313|Proteomes:UP000032142};
RN [1] {ECO:0000313|Proteomes:UP000032142}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. AKA8401 {ECO:0000313|Proteomes:UP000032142};
RA Mudge J., Ramaraj T., Lindquist I.E., Bharti A.K., Sundararajan A.,
RA Cameron C.T., Woodward J.E., May G.D., Brubaker C., Broadhvest J.,
RA Wilkins T.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KN437965; KHG26690.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0B0PNX6; -.
DR Proteomes; UP000032142; Unassembled WGS sequence.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR CDD; cd22249; UDM1_RNF168_RNF169-like; 1.
DR CDD; cd00201; WW; 2.
DR Gene3D; 2.20.70.10; -; 2.
DR Gene3D; 1.10.10.440; FF domain; 4.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR039726; Prp40-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR11864; PRE-MRNA-PROCESSING PROTEIN PRP40; 1.
DR PANTHER; PTHR11864:SF0; PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST); 1.
DR Pfam; PF01846; FF; 4.
DR Pfam; PF00397; WW; 2.
DR SMART; SM00441; FF; 4.
DR SMART; SM00456; WW; 2.
DR SUPFAM; SSF81698; FF domain; 4.
DR SUPFAM; SSF51045; WW domain; 2.
DR PROSITE; PS51676; FF; 4.
DR PROSITE; PS01159; WW_DOMAIN_1; 1.
DR PROSITE; PS50020; WW_DOMAIN_2; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000032142}.
FT DOMAIN 198..231
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 239..272
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 447..501
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 535..589
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 607..670
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 742..797
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 99..144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 158..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 278..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 373..401
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 801..960
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 583..618
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 117..144
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..206
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 281..295
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..353
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 380..401
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 801..905
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 914..930
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 960 AA; 109388 MW; 00F70EAAE5AC945C CRC64;
MDRILVEVTR RIPGEVFEAN FAYVLEWLTI LNPLPHWPPA VGSMGPQSYG SPLSSQFRPV
VPTQQGQHFV PAASQQFRPV GQVPSPNIGM PAVQNQQMQF SQPMQQFPPR PNQPGLSTPS
QQPIQFAPSS FGLPQNNVSA PSQFHPMSQV HAPVAPVAGQ PWLSTGNQNV SLATPTQHTS
QQPPPSSADT NANVPSLTPQ SSDWQEHTSA DGRRYYYNKR TRQSSWEKPL ELMTPIERAD
ASTVWKEFTT PEGRKYYHNK VTKESKWTIP EELKLAREQA QAAASQGTPS GSGVAPQAPV
ATAVSAAETP TTAIPVSSNT LQDSSPVSVT PVANPSPTSV TGPTTGPVAQ SAAMSATGVQ
LPVVSVTPVP AVPSRGSTVP APSVGANTAV TRSSETTSTQ DTMHFADGAS AQDIEEAKKG
MATAGKVNMT PVEEKVPDDE PLVYANKLEA KNAFKSLLES ANVQSDWTWE QTMREIINDK
RYGALKTLGE RKQAFNEYLG QRKKLEAEER RMRQKKAREE FTKMLEEREY AAEEKRRNIA
EYRKFLESCD FIKANSQWRK VQDRLEDDER CSRLEKIDRL LIFQDYIHDL EKEEEEKKKM
QKEQLRRAER KNRDAFRKLM EENVADGTLT AKTYWRDYCL KVKELPQYLA VASNTSGSTP
KDLFEDVAEE LDKQYHEDKT RIKEAMKTGK VTMVYSWTFE DFKTAISEDV GSSSISDINL
KLVYDELLER AKEKEEKEAK KRQRLADDFT RLLHTYKEIT ASSNWEESKP LFEESQEYRS
IAEESFRREI FEEYITHLQD KAKEKERKRE EEKAKKEKDR EEKDKRKEKE KERKEKERER
EREKGKDRTK KDETDSENLD ISDSYGHKEE KKKEKEKDRK HRKRHAADDG SSDKDDREES
KKSRRHGSDR KKSRKHAHSP DSDSESRHRK HKRDHRDGSR RNSGYEELED GELGEDGEIQ
//
