ID A0A0B0PZN2_GOSAR Unreviewed; 1004 AA.
AC A0A0B0PZN2;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Superkiller viralicidic activity 2-like 2 {ECO:0000313|EMBL:KHG30545.1};
GN ORFNames=F383_03713 {ECO:0000313|EMBL:KHG30545.1};
OS Gossypium arboreum (Tree cotton) (Gossypium nanking).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29729 {ECO:0000313|EMBL:KHG30545.1, ECO:0000313|Proteomes:UP000032142};
RN [1] {ECO:0000313|Proteomes:UP000032142}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. AKA8401 {ECO:0000313|Proteomes:UP000032142};
RA Mudge J., Ramaraj T., Lindquist I.E., Bharti A.K., Sundararajan A.,
RA Cameron C.T., Woodward J.E., May G.D., Brubaker C., Broadhvest J.,
RA Wilkins T.A.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KN457901; KHG30545.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0B0PZN2; -.
DR Proteomes; UP000032142; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18024; DEXHc_Mtr4-like; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 2.40.30.300; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF7; EXOSOME RNA HELICASE MTR4; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032142}.
FT DOMAIN 81..237
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 312..527
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 745..800
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1004 AA; 114276 MW; 5A86C83AB983A078 CRC64;
MESLKRKSDE GISSESPPPP QKKKHHGEDV SPLAEEAVGC VHDVSYPEGY VPSASSLQFP
ADSKPAKEFP FTLDPFQSEA INCLNRDESV LVSAHTSAGK TVVALYAIAM SLRNNQRVIY
TSPIKALSNQ KYREFKEEFS DVGLMTGDVT IDPNASCLVM TTEIWRSMQY KGSEIVREVA
WVVFDEVHYM RDRERGVVWE ESIVMAPKNS RFVFLSATVP NAKEFADWVA KVHKQPCHIV
YTDYRPTPLQ HYIFPARGDG LFLVVDEKGK FREDSFQKAL NALVPTSESD KKRNNGKSQN
GLVMGKVSEQ SDIFKLVKMI IQRQYDPVII FSFSKRECEF LAMQMAKMDL NDDDEKGNIE
TIFWSAMDML SDDDKKLPQA NICYAFYEML LQVSNMLPLL KRGIGVHHSG LLPILKEVIE
ILFQEGLIKC LFATETFSIG LNMPAKTVVF TNVRKFDGDK FRWISSGEYI QMSGRAGRRG
IDARGICILM VDERMEPSTA KMMLKGNADS LNSAFHLSYN MLLNQLRCEE ADPESMLRNS
FYQFQADRSI PDLETQVKAL EEERDSMIIE DEDSLKNYYS LIQQYKCLKN DIRDIVFSPK
YCLPYMKSGR PICIQCIDDE TSPSFSVEDH VTWGVLMDFH RVKSVIEDDA CKRPEDASYA
LDILTRCNVS KDGVGKKKIK IVPLKEPGEP LVVSVPLSQV TSLSSARLNI PKDLLPLEAR
ENALKKLSEF ISRYATGMPL DPEEMNIQSN SYKKAVRRLE ALENLFEKHD IAKSPLIEQK
LKLLNRKEEL TARIRSIKKT MRSSTALAFK DELKARKRVL RRLGYITSDD FVELKGKVAC
EISSADELTL TELMFSGVLK DVKAEEMVSL LSCFVWQEKL QDAAKPRDEL ELLFTQLQDT
AWRIAKVQLE CKVQIDVESF VSSFRPDIME AVYAWAKGSK FYEIMEITQV FEGSLIRAIR
RLEEVLQQLI LAARSIGETE LETKFEEAVS KIKRDIVFAA SLYL
//
