ID A0A0B2P9K2_GLYSO Unreviewed; 446 AA.
AC A0A0B2P9K2;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Putative ATP-dependent RNA helicase DDX59 {ECO:0000313|EMBL:KHN04358.1, ECO:0000313|EMBL:RZC11164.1};
GN ORFNames=D0Y65_011404 {ECO:0000313|EMBL:RZC11164.1}, glysoja_030952
GN {ECO:0000313|EMBL:KHN04358.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:KHN04358.1};
RN [1] {ECO:0000313|EMBL:KHN04358.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Root {ECO:0000313|EMBL:KHN04358.1};
RA Lam H.-M., Qi X., Li M.-W., Liu X., Xie M., Ni M., Xu X.;
RT "Identification of a novel salt tolerance gene in wild soybean by whole-
RT genome sequencing.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:RZC11164.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZC11164.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KN669328; KHN04358.1; -; Genomic_DNA.
DR EMBL; QZWG01000005; RZC11164.1; -; Genomic_DNA.
DR Proteomes; UP000053555; Unassembled WGS sequence.
DR Proteomes; UP000289340; Chromosome 5.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.60.220; -; 1.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR007529; Znf_HIT.
DR PANTHER; PTHR48365; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48365:SF1; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR Pfam; PF04438; zf-HIT; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:KHN04358.1};
KW Helicase {ECO:0000313|EMBL:KHN04358.1};
KW Hydrolase {ECO:0000313|EMBL:KHN04358.1};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Nucleotide-binding {ECO:0000313|EMBL:KHN04358.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000289340};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 259..272
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 39..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 46..60
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..91
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 446 AA; 50470 MW; EA9A55B08F7CCE0A CRC64;
MGTRTNFYKN PSISYKKRLS ISSVLQNLHA YNIAAGNVPP ADPPQATSTA NVPPSNPPHL
TPSARLKRSR NPEPPEFLRE YRDDAPSSMS HHDYIQNRRK EVVSSRNHDR VELTEEVLGN
SNSTLPLVDY DASDEDTPSE CEETHTLLNS GQQEEFDGVK KSRNQQRFPV SGEPVCLICG
RYGEYICNET DDDVCSMECK SELLEILKLN EGSSHNQVRD ISSSGISAAV PVPVFGDDTW
DYNQHHWSKK TCSLSTYECW KCQRPGHLAE DCMVTEGSNR SSSIPKDLLQ LYRRCHQIGK
DLLAANCNVC RRSSNLATCL DCSIVLCDGA GHLIEHIRTH PSHQKYYSHK LKRLVKCCKS
TCKVTDIKDL LVCHYCFDKA FEKFYDMYTA TWKGAGLAIM WGSICCEDHF TWHRMNCLNA
NVEESAYILK PDGHKGKRTQ LSDFIF
//
