ID A0A0B2Q1M0_GLYSO Unreviewed; 1782 AA.
AC A0A0B2Q1M0;
DT 04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT 04-MAR-2015, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Homeobox protein 10 {ECO:0000313|EMBL:KHN15491.1};
DE SubName: Full=Homeobox-DDT domain protein RLT1 isoform A {ECO:0000313|EMBL:RZC03799.1};
GN ORFNames=D0Y65_018444 {ECO:0000313|EMBL:RZC03799.1}, glysoja_038162
GN {ECO:0000313|EMBL:KHN15491.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:KHN15491.1};
RN [1] {ECO:0000313|EMBL:KHN15491.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Root {ECO:0000313|EMBL:KHN15491.1};
RA Lam H.-M., Qi X., Li M.-W., Liu X., Xie M., Ni M., Xu X.;
RT "Identification of a novel salt tolerance gene in wild soybean by whole-
RT genome sequencing.";
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:RZC03799.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZC03799.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR EMBL; KN660972; KHN15491.1; -; Genomic_DNA.
DR EMBL; QZWG01000007; RZC03799.1; -; Genomic_DNA.
DR OrthoDB; 394285at2759; -.
DR Proteomes; UP000053555; Unassembled WGS sequence.
DR Proteomes; UP000289340; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR044977; RLT1-3.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR PANTHER; PTHR36968:SF17; HOMEOBOX DOMAIN PROTEIN; 1.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF15612; WHIM1; 1.
DR Pfam; PF15613; WSD; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS51913; HTH_HARE; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000289340};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 43..103
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 557..616
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 739..808
FT /note="HTH HARE-type"
FT /evidence="ECO:0000259|PROSITE:PS51913"
FT DNA_BIND 45..104
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 1..56
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 101..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 389..443
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 838..879
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1225..1256
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1532..1782
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..52
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 842..861
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 864..879
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1236..1256
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1547..1562
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1563..1587
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1626..1641
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1647..1662
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1724..1755
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1782 AA; 199412 MW; 46A51D29C955ED9D CRC64;
MEGEGCSEGE NNRKRGGSDD DSNENNNNNN NGSSGKIVNS NEGQSKPKRQ MKTPFQLETL
EKAYAVDNYP SETMRVELSE KLGLSDRQLQ MWFCHRRLKD KKDLPSKKPP RKVLAEPLPD
SPRDDPRLSL ELANEYGSGS GSGSSPYARV EPLNVVPRCV PGYYESPQAK LELRAIACVE
AQLGEPLRDD GPILGLEFDP LPPDAFGAPI AAVTEQQKLP SFAYDSKIYE RHDARTNKAL
ARTFRDNQFL PNKSGIRSDA SGQFSQSHLH DPIEGFVRNP PFAHGNEHLP RIHATKGHSS
RVRLLSQQDK QLIPYQSPSR DDDAAPQREL YPNIANAGKN SHSTGHQIVG PENLHALPSV
QVLHNNATWI EKKRKSDDAH DVEAHEMKIR KELEKQDNLR RKSEERTRKE MERQDRERKK
EEERLMRERQ REEERARREQ KREMERREKF LLKENLKAEK TRQREELRKE REAERRKAAL
EKATARRMAK ESMELIEDEQ LEMMELAASS KGFSSIVHLD FDTLQHIESF RDSLCVFPPK
SVKLRKPFAI KPWINSENNV GNLLMVWRFL INFADVLELW SFTLDEFVQA FHDYDSRLLG
EIHVSLLKVI IKDIEDVART PSTGLGANQN GAANTGGGHP EIVAGAYAWG FDIRNWHKHL
NLLTWPEIFR QLALSAGYGP QLKKRSISWS YANNKDEGRS CEDIISTLRN GSAAENAVAK
MHERGLLAPR RSRHRLTPGT VKFAAFHVLS LEGEKGLNVL ELAEKIQKSG LRDLTTSKTP
EASISVALTR DAKLFERIAP STYCVREAFR KDPADAESIL SEARKKIQIF ENGFLAGEDA
DDVERGESES DEIDEDPEVD DLVNPTSANK TSEQCDDFSS NGKENLGHNV ELQGEFDKNL
PCFPESGSKN ADAPIAVTGQ SGACEDLDVG NLGEDNMEID ERKPGESWVQ GLAEEEYSDL
SVEERLNALA VLVGVANEGN SIRVVLEDRL EAANALKKQM WAEAQVDKVR LKDDTFSKSD
FPSINGNKVE IQYSCPVTEG KQSPLLGINI GNNINNSVPS PSIAENHKAA SGSQSLSVEK
HSSVQDLCTG PDNPQAQSFV QYSKRSRSQW KSYISHMAEE MYVYRSLPLG QDRRRNRYWQ
FVASASSNDP GSGRIFVEYL DGNWRLIDTE EAFDVLLNSL DSRGIRESHL RLMLQKVEIS
FKENVRLNTQ CSKIGSIGET CVKNEADETD SSPDRHTGSD SPSSTLCGLN SDTSETSSSF
KIELGKSESD KKSALRRYQD FQKWMWKECY NSPILCAMKY GKKRCKPQVV ICDICLNPYF
FEDSHCSGCH QTFSSNSGFS FSKHAFQCGD KLSKNICILD SSLPLRTRLL KAMLAFIEVS
VPPEAFQSNW TEDIRRHWSV KLSKSSSVEE LLQILTLLER ALKRDFLSST FSTTGEQLGL
NSMSKSAAQT STDPESVAVL PWVPLTTSAA SLRLLEFDAS IVYVPHEKPE PCEEKEDRVY
MKLPSRYNPS KSSKAAEAAD LDHDEFMKVK SASVKIVQSN NKRGRGSRDK GRGKKLSKTK
QNTGHRGAKV AGNASQRIKQ QEVGSQGQAG GRGRRTVRKR RVGKKAVEDL LLGHRGATHS
SSIGRESLRS MDEDWDDEKA SPVTPIHMGA ANNSNSIEEA ESDDNVQAME SDDNVQAMES
DDNEQAAESD DNGQAVEYDQ GNWEIGFNGA PSRWSRDLVG MSDDDVEASE DDDDNDNVIG
IENNGEEDSE ADAMSEEGSD GTANRIVNEE SSESDVSEDS SD
//
