ID A0A0B8P1B7_9VIBR Unreviewed; 960 AA.
AC A0A0B8P1B7;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=DNA 3'-5' helicase {ECO:0000256|ARBA:ARBA00034808};
DE EC=5.6.2.4 {ECO:0000256|ARBA:ARBA00034808};
GN ORFNames=JCM19231_3239 {ECO:0000313|EMBL:GAM57123.1};
OS Vibrio ishigakensis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=1481914 {ECO:0000313|EMBL:GAM57123.1, ECO:0000313|Proteomes:UP000031671};
RN [1] {ECO:0000313|EMBL:GAM57123.1, ECO:0000313|Proteomes:UP000031671}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 19231 {ECO:0000313|Proteomes:UP000031671};
RA Sawabe T., Meirelles P., Feng G., Sayaka M., Hattori M., Ohkuma M.;
RT "Vibrio sp. C1 JCM 19231 whole genome shotgun sequence.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:GAM57123.1, ECO:0000313|Proteomes:UP000031671}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 19231 {ECO:0000313|Proteomes:UP000031671};
RG NBRP consortium;
RA Sawabe T., Meirelles P., Feng G., Sayaka M., Hattori M., Ohkuma M.;
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=5.6.2.4;
CC Evidence={ECO:0000256|ARBA:ARBA00034618};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAM57123.1}.
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DR EMBL; BBRZ01000045; GAM57123.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0B8P1B7; -.
DR Proteomes; UP000031671; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0003916; F:DNA topoisomerase activity; IEA:InterPro.
DR GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR Gene3D; 3.40.91.30; -; 1.
DR Gene3D; 3.30.65.10; Bacterial Topoisomerase I, domain 1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR014017; DNA_helicase_UvrD-like_C.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013498; Topo_IA_Znf.
DR InterPro; IPR014016; UvrD-like_ATP-bd.
DR PANTHER; PTHR11070:SF63; DNA HELICASE IV; 1.
DR PANTHER; PTHR11070; UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER; 1.
DR Pfam; PF00580; UvrD-helicase; 1.
DR Pfam; PF13361; UvrD_C; 1.
DR Pfam; PF01396; zf-C4_Topoisom; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51198; UVRD_HELICASE_ATP_BIND; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW ProRule:PRU00560};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|PROSITE-
KW ProRule:PRU00560};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|PROSITE-
KW ProRule:PRU00560};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW ProRule:PRU00560}; Reference proteome {ECO:0000313|Proteomes:UP000031671}.
FT DOMAIN 184..646
FT /note="UvrD-like helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51198"
FT BINDING 205..212
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00560"
SQ SEQUENCE 960 AA; 108319 MW; EEB896D88C8AC600 CRC64;
MSVVSISVNL WGKLTNSFDT VTFEDGTINL YRKGRRIDTI DTDNFQSFTV SSTSWLGGSI
TLPKSTCLNG LNPKQVSSFT EAINTAIEKR VASRTLSDIK DFELNAVNSF PRDSESKHLA
QICESIHLLT TQRPSLLSSF GDSDRNLVRL IADFYPLDIA SLRAFHEGNQ LQQREEFYDA
VESNPLTQEQ RLAVIRNNDR NMVLAAAGTG KTSVMVAKIL DLVDRKIASP SQILTMAYNK
SAATELDERL SEKAQKSNVH LEERPQISTF HALGRKILQE SGIDTRLSQL TQDSDKLDIW
VSRWLQTYLL KHFDKLPTLI EMIAPPIDPM SYRSAAAFQR YQRDNTFSTI KGEKVKGFQE
LLIANYLFIK GVEYEYEPQY PVKQRVSAGV DYRPDFYLPQ ADVYLEHFGI SRDGSTRIDI
DSVKYNSDIE WKRQFHESNG TKLVETYHYN WVEGTLNNRL DSLISELEIP AHPKNKDEIL
KHINESDYIS DGAKILRKCL SAIRSEGLSP ATIFQRLTHN DIIDAKSTTD LLTQLHDDYI
EELRSNESID FDDMINLATE VVASDEFTPS WSQILIDEFQ DISASRMKLI TTIIEMSKTK
PALTVVGDDW QSIYRFSGGK LELTTRFADL IGSYSETKLQ KTFRYNNSIA KTAGLFVMEN
PEQYQKQIQT HTVVDTPQVY LLDDKKNGKD ALETKIYEVV SKIRSHDSQG SIAIIGRYNY
LLSEANIALG KRNARDGVKF WTFHKSKGLE ADYCILIGFS QGKQGFPSDT LENTVVEALL
PSIDSFPDSE ERRLFYVGVT RAKKKAYIIA DPSSPSKFVT ELLNPKFGVG IHSESFKQAY
RTTFKCKHCE EGFLKRIEGQ YGDFYTCSTG NGCAVKNVRS CSKCGSPSSD TRSYSVCHNP
ACGHKSKVCP ACGRPMVKRT GKKGIFWGCS GYSLSHDQCT YTEKLSASDT ETGSSRKKRA
//