ID A0A0B8T4R8_9SPHI Unreviewed; 467 AA.
AC A0A0B8T4R8;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Glycoside hydrolase family 28 {ECO:0000313|EMBL:KGE15153.1};
GN ORFNames=DI53_1071 {ECO:0000313|EMBL:KGE15153.1};
OS Sphingobacterium deserti.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Sphingobacterium.
OX NCBI_TaxID=1229276 {ECO:0000313|EMBL:KGE15153.1, ECO:0000313|Proteomes:UP000031802};
RN [1] {ECO:0000313|Proteomes:UP000031802}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACCC05744 {ECO:0000313|Proteomes:UP000031802};
RA Teng C., Zhou Z., Li X., Chen M., Lin M., Wang L., Su S., Zhang C.,
RA Zhang W.;
RT "Whole-Genome optical mapping and complete genome sequence of
RT Sphingobacterium deserti sp. nov., a new spaces isolated from desert in the
RT west of China.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KGE15153.1, ECO:0000313|Proteomes:UP000031802}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACCC05744 {ECO:0000313|Proteomes:UP000031802};
RX PubMed=25830331;
RA Teng C., Zhou Z., Molnar I., Li X., Tang R., Chen M., Wang L., Su S.,
RA Zhang W., Lin M.;
RT "Whole-Genome Optical Mapping and Finished Genome Sequence of
RT Sphingobacterium deserti sp. nov., a New Species Isolated from the Western
RT Desert of China.";
RL PLoS ONE 10:E0122254-E0122254(2015).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 28 family.
CC {ECO:0000256|ARBA:ARBA00008834, ECO:0000256|RuleBase:RU361169}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KGE15153.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JJMU01000016; KGE15153.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0B8T4R8; -.
DR STRING; 1229276.DI53_1071; -.
DR PATRIC; fig|1229276.3.peg.1105; -.
DR eggNOG; COG5434; Bacteria.
DR Proteomes; UP000031802; Unassembled WGS sequence.
DR GO; GO:0004650; F:polygalacturonase activity; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.160.20.10; Single-stranded right-handed beta-helix, Pectin lyase-like; 1.
DR InterPro; IPR000743; Glyco_hydro_28.
DR InterPro; IPR006626; PbH1.
DR InterPro; IPR024535; Pectate_lyase_SF_prot.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR PANTHER; PTHR31339; PECTIN LYASE-RELATED; 1.
DR PANTHER; PTHR31339:SF9; PLASMIN AND FIBRONECTIN-BINDING PROTEIN A; 1.
DR Pfam; PF00295; Glyco_hydro_28; 1.
DR Pfam; PF12708; Pectate_lyase_3; 1.
DR SMART; SM00710; PbH1; 3.
DR SUPFAM; SSF51126; Pectin lyase-like; 1.
DR PROSITE; PS00502; POLYGALACTURONASE; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361169};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361169};
KW Reference proteome {ECO:0000313|Proteomes:UP000031802};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..20
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 21..467
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002125193"
FT DOMAIN 54..106
FT /note="Pectate lyase superfamily protein"
FT /evidence="ECO:0000259|Pfam:PF12708"
SQ SEQUENCE 467 AA; 52237 MW; 6B5FC70994619B0E CRC64;
MMKKIIGSIL ICLAISYSMA QETTWTAASQ PLAEIEALKK QIVAPTFRSK DYAITNYGAK
GDGVTKNTEA IRKAIEQCNK DGGGRVVVPN GIFLTGAIYL KSNVNLHIQE GATILFSRDS
SDYPMVFTRW EGMECMNFSP FIYAYGEENI AITGKGLLDG NSDNDHWWYW CGARKYGWDE
SKPGEQKPAR ALLHQQMAEE MDSRKRIYGD GHFLRPNFVQ PYQCKNVWIA DVKMINSPMW
NLNPVLCENV LIERVKIVSH GPNNDGCDPE ACKNVWIKDC YFDTGDDCIA IKSGRDEDGR
NIGRPAENHI IENCMMKDGH GGVVIGSEIA GGARNIYALN NVMDSPNLDR ALRIKTSSSR
GGTIENVFFY NTEVGQYKEA AVRFNMFYEK PGKHIPTIRN IWVENLEVKG GGKYAVLSSA
YESSPVTNFT MINCKIDGVQ EPYKVDHLKQ VTLKNVVING KPISSFD
//
