ID A0A0B8ZTV8_9SPHN Unreviewed; 798 AA.
AC A0A0B8ZTV8;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Type IV secretory pathway VirD4 components-like protein {ECO:0000313|EMBL:KHS41716.1};
GN ORFNames=NJ75_04538 {ECO:0000313|EMBL:KHS41716.1};
OS Novosphingobium subterraneum.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=48936 {ECO:0000313|EMBL:KHS41716.1, ECO:0000313|Proteomes:UP000031338};
RN [1] {ECO:0000313|EMBL:KHS41716.1, ECO:0000313|Proteomes:UP000031338}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12447 {ECO:0000313|EMBL:KHS41716.1,
RC ECO:0000313|Proteomes:UP000031338};
RA Gan H.M., Gan H.Y., Savka M.A.;
RT "Draft genome sequence of Novosphingobium subterraneum DSM 12447.";
RL Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KHS41716.1}.
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DR EMBL; JRVC01000035; KHS41716.1; -; Genomic_DNA.
DR RefSeq; WP_039338499.1; NZ_JRVC01000035.1.
DR AlphaFoldDB; A0A0B8ZTV8; -.
DR STRING; 48936.NJ75_04538; -.
DR PATRIC; fig|48936.3.peg.4570; -.
DR Proteomes; UP000031338; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR019476; T4SS_TraD_DNA-bd.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF10412; TrwB_AAD_bind; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..42
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 114..133
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 198..587
FT /note="Type IV secretion system coupling protein TraD DNA-
FT binding"
FT /evidence="ECO:0000259|Pfam:PF10412"
FT REGION 617..798
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 663..717
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 756..770
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 798 AA; 88217 MW; 1ED6676B4D670EFF CRC64;
MKRNLVNFTR GSQLLGHFSF MFAAGLKGPL IVAALVISWT SWWTISAGLT DHEVYLVWMR
IYAAIYGFME FDPDKRITLE TAFGTTIQFP IALLEHYPPV VHAWERLMAL LTSALWRSGF
LLVPAFAVFY WFAERFGGRS KERKHERGAM LVTLPELVDE LTAHNRRERT RELDTALGWK
WRLSLPREIA RVFPYRPSHI ATVSYPWRLE QSHAMLIGTT GMGKTVAISD MIAEARAKGQ
RCVVFDLTGA FIEHFHAAHC DIILNPLDAR CPQWSLFDEC RSEGEFWAAA DALVPHDGGG
EAQFWVIAAR ALFVEFCLKL VAEGRATNDA LARELMTADL SRVHAMMRGT IADPLTAPEA
ARMAESIRAV FNVNAKALKL LPTAGPRFSV RQWIEDGADS ARSEGSILFI SARYVDMSVC
AQLLTLWLDT AMNTLMTMPR TRDLKCWFFV DELGALHRLP ALEKGLQTAR NFGGAIVLGL
HAYAKLKEVY GENMAMTLAS LARTKLILGT ADRETATWCS DFIGHRQVRD MEEGYTYGYN
NARDAVSLTP RKHIEPLLLP DQLMNLPRLS GYIKFPDGFP AAPVKLKPVD RPKRAETFIA
RVKDSPKARV TEIHPAAEQA EQKAAPTGSE HPSSNDDGAG KPVVPKQGEL AFDQGARAAS
KKEPVAPAKD LGRAVERTPG KTSKEREPAT RSGQDKAGKA KTDRSNTRTD ARARKARPSA
RPVLPTGEAA AARDQSASPK GTPQACMPGT EGLQQGKPDN PKSQSSSDAA ARKLMIEDGL
REHEPPPITG PDLGDMEM
//
